Cryptococcus neoformans var. grubii H99: CNAG_06796
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Entry
CNAG_06796 CDS
T08175
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03013
Nucleocytoplasmic transport
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNAG_06796
03015 mRNA surveillance pathway
CNAG_06796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_06796
03041 Spliceosome [BR:
cng03041
]
CNAG_06796
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CNAG_06796
Spliceosome [BR:
cng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
CNAG_06796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
23889964
NCBI-ProteinID:
XP_012047100
UniProt:
J9VK82
LinkDB
All DBs
Position
2:17403..19442
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AA seq
439 aa
AA seq
DB search
MADTGMRGTNALQDSRFKDKELASIKSTKFPKHFSEKVDLRKVNISVLRPWVAEKVTELI
KVEDDIVVEYVFGMLEDRENPTPDPKKMQVSLVGFMDKYGAAAFMDALWKLLLSAQKTVG
GVPAEFIEAKKQELQRKQQESTSLPLPPPQPLAAHPQARSSGPAGRSRAEDYYGREPRGG
FGGRGSGGGGDRGGRGEFPRGRDGRDGLPTRPYPPPRSPRHRSLSRSRSRSRSPPPRRPF
TNANSGRYPDRHPDRDRERDWGNRRGNQRGESFRDRPRDEGWASRGSGGGGGSSVNPRER
NYRRPTPPRRPSPPPSAAQIRIRGAGRGRSLSRSPPPRRSLSRSRTPSRSLPRSRSPSPI
RRGRGHGREYERGSSDRGRSLSRSRSRSRSRSRNDTPPRAQTRKHPRSMSRSRTRSRSRS
RSRTPVRQRTRDYTPTPEL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacaggtatgcggggcacaaatgcccttcaagactctaggttcaaagacaag
gaacttgccagcatcaaatccacaaaattccctaaacatttctctgaaaaagtcgatctc
cgcaaagtcaacatctctgtcctccgtccttgggttgctgaaaaggtcaccgagcttatc
aaagtggaggacgatatcgttgtggagtatgtctttgggatgcttgaagatcgtgagaac
cctactcccgacccgaagaaaatgcaagtctccctcgtagggttcatggacaagtacggc
gccgcagcattcatggacgctctttggaaactacttctttcggcgcaaaagacggttggc
ggtgttcccgccgagttcatcgaagccaaaaaacaagaactccaacgaaaacaacaagaa
tccacctccctccctcttcctcctccccagcctttggcagcccatcctcaagcccgctca
tccggcccagcaggaagatcgagagcggaagattactatggccgtgagccacgtggaggg
tttggtggacgtggtagtggtggtggaggtgatcgtggaggacgaggggaattccctcga
ggaagagacgggcgagatgggctccccacccgcccatacccccctccccgctctcctcgc
catcgatccctttcacgatcgcgttcccgatcccgttcgcccccgccccgtcgacctttt
acgaatgccaactctggccgataccccgaccgacaccccgatcgtgaccgagaacgagat
tggggtaaccgccgtggtaaccaaagaggtgaatcatttagagatcgaccaagagacgag
ggatgggcttcccgcggtagtggtggtggtggtggctcgtccgtcaatcccagagaaaga
aattaccgtcgccctaccccaccacgccgtccttccccgcccccttctgcagctcaaatt
cgaatccgaggcgcgggccggggtcggtctctctcacgttctcctccccctcgtcgttcg
ctctcccgttcgcgtactccatctcgatccctgccacgttcacgttccccctctcctatt
cgccggggccgcggccacggacgcgagtacgaacgaggctcatctgaccgcggtaggagc
ctgagccgaagcagaagccgaagcaggagcaggagcaggaatgacaccccgccacgtgca
cagacacgaaaacacccacgctccatgtctagatcacgaacccgatctcgctcacgatct
cgatcccggacacctgtcagacaaaggacgagggattacactcccacgcctgaactttga
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