Cryptococcus neoformans var. grubii H99: CNAG_06798
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Entry
CNAG_06798 CDS
T08175
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNAG_06798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_06798
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNAG_06798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
CD99L2
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
23889966
NCBI-ProteinID:
XP_012047098
UniProt:
J9VF89
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All DBs
Position
2:8097..10692
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AA seq
622 aa
AA seq
DB search
MPRNKKRSQRQPSPQPPRQEIKHDWKKDDEELELEQALFGRKQKKFKPDNNNDEESGMSE
VEDNDLFTVDAPLAPEFQVDLGGDGYEYAGGDGDSDSDSEISGDENEFRAFSPSPSHDRS
IYGGSGSESGSEDEDETDRPTITLPDDIVDLPSSHDEELSRSKRVPLWNDPADEMAKVDI
SASRRLKKVDRGKRKTVEGELVGGKELQARLREQFERLHPPPEWAKRRTLAGTPSLSSLL
TSNKSFISHSSLPSAQDPLARPPLPPGTIDLKRVRNANHTNPTVSKREAEGGKGGVVDMA
WHPSKQVGVLAVGGGDRRVKFFQIDGHTNPTLLTLHIPSLPLSKLTYHPSGTSLLLTGSR
PFYYTYDLSSQKCLRSPRNLFGSVASREGDAPNELSRHTFSPDGSLLAVAGRRGAVSILS
HSISGSGVGGMVAELRSGRGGTATALSFSSNGKYLSVLGGRDGAEVEVWDVAQREVVGKW
RDDGMRGGGVMESSRDGGWVAVGSNTGLVNLYSPSLLPPSTPSPSSTLTTQATPLKTLSH
LTTPITSLSSHPSSSILCISSSTRKDQLKLYHLPTGNAFSNWPTQGTPLGRVTTTGFSES
GEWLGVGNAGGKVLLWSLRHWA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaaacaagaagagatcacagcgacagccatctccacagccaccaaggcaggag
atcaagcatgactggaaaaaagatgatgaggaattggaactcgaacaggctctcttcgga
cgcaaacagaaaaagttcaagccagataataacaacgacgaggagagtggaatgagtgaa
gtagaggacaacgacttgtttacagttgacgcacccctcgcacccgaatttcaagttgac
ctcggtggtgatggttacgaatacgccggcggcgacggcgacagcgactctgattctgaa
atttcaggagacgaaaacgagttcagagcgttttcaccttcccccagtcacgaccgctcc
atctacggtggctctggttccgagtctggatctgaagatgaagatgagactgaccgccca
acaatcacccttcccgacgatatcgtcgatctcccttcttctcatgacgaagaactatca
cgttcaaaaagagtaccgctttggaatgaccctgcggacgagatggcaaaggttgacatc
agtgcgtcgagacggttgaaaaaagtagatcgggggaagcggaagactgtggaaggggaa
cttgtaggtgggaaagagctgcaagcgagattaagagagcaattcgaacggctccatccc
ccacctgaatgggccaaacgacgtactctcgccggtactccctccctctcctccctcctc
acttccaacaaatcgttcatctctcactcttccctcccctccgcacaagaccctttggcc
cgtccacctctcccgccagggacaattgaccttaaacgtgtgcgtaacgcaaaccacacc
aacccgaccgtcagtaaacgagaagccgaaggcggtaagggtggagtggtggatatggcg
tggcatccaagcaagcaggtgggagtattggccgttggtggtggcgataggcgagtaaag
tttttccagattgacggacacacaaaccccactttactcaccctccacatcccctcactc
cctctctccaaactcacttaccatccctcggggacctccctcctccttaccggttctcgc
cccttttactacacatacgacctctcgtcacaaaaatgcttgcgctccccacgcaaccta
ttcggctctgtcgcttcccgtgagggggacgcacccaacgaattgtcgagacatactttc
tccccggatgggagtcttctcgctgtcgcgggacgacgtggtgccgtctctatcctctcc
cactccatctctggcagtggggtaggcgggatggtggcagaactgagatcaggtagaggc
gggacagcgacagcactgtccttctcctccaacggaaagtacctcagtgtgttgggaggt
agagatggggcagaggtggaagtttgggatgtagcgcaaagggaggtggtgggcaagtgg
agggatgatgggatgaggggtggtggggttatggagtcgagtagggatggaggatgggtc
gctgttggatccaacaccggcctcgtcaacctctactccccctctctcctccctccgtcc
accccatccccttcctctaccctcaccacccaagcaacgccacttaagaccctctcccac
ttaacgactcccataacctccctctcctcccacccttcctcctccatcctctgcatctcc
tcctccacccgtaaagaccaattgaagttataccaccttcctactggaaacgccttttca
aactggcctacgcaggggaccccgttgggacgggtgacgacgacaggatttagtgagagt
ggagaatggttgggagtggggaatgccggtgggaaagtgctgctttggagtttgagacat
tgggcgtaa
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