KEGG   Cryptococcus neoformans var. grubii H99: CNAG_07424
Entry
CNAG_07424        CDS       T08175                                 
Name
(RefSeq) DNA-directed RNA polymerase I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03020  RNA polymerase
cng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNAG_07424
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNAG_07424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cng03021]
    CNAG_07424
   03400 DNA repair and recombination proteins [BR:cng03400]
    CNAG_07424
Transcription machinery [BR:cng03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNAG_07424
  RNA polymerase III system
   RNA polymerase III
     CNAG_07424
  RNA polymerase I system
   RNA polymerase I
     CNAG_07424
DNA repair and recombination proteins [BR:cng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNAG_07424
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_ribbon_TFIIS Zn_Ribbon_TF DUF5816 Zn_ribbon_DZR_6 DUF7129 Zn_ribbon_recom Zn_ribbon_NUD DZR HypA Zn_ribbon_8 DmmA-like_C Zn_ribbon_10 Zf_2nd_IFT121 DUF951 Zn_ribbon_13 PHD_pln ZnF_RZ-type
Other DBs
NCBI-GeneID: 23890271
NCBI-ProteinID: XP_012048966
UniProt: J9VSU4
LinkDB
Position
5:531759..532476
AA seq 70 aa
MSQPQSRFTQQNPNPMPDRNVKAPETISYICGDCGAQTAMQPSEFIRCKECGHRVMYKPR
TTRIVQFEAR
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcccagcctcaatctcggttcacccagcaaaatcctaaccccatgcctgatcgaaat
gtcaaggcccccgagaccatctcttatatatgcggcgattgtggggcgcagactgctatg
caaccttcagagttcattagatgcaaggaatgcggccaccgagttatgtacaagcctcgg
acaacgagaatcgtgcaattcgaggctcgatga

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