Cryptococcus neoformans var. grubii H99: CNAG_07539
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Entry
CNAG_07539 CDS
T08175
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03030
DNA replication
cng03410
Base excision repair
cng03420
Nucleotide excision repair
cng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNAG_07539
03410 Base excision repair
CNAG_07539
03420 Nucleotide excision repair
CNAG_07539
03430 Mismatch repair
CNAG_07539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cng03032
]
CNAG_07539
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_07539
DNA replication proteins [BR:
cng03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CNAG_07539
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CNAG_07539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_30
RuvB_N
AAA_33
AAA_16
AAA_14
AAA_28
AAA_24
Kinesin_assoc
AAA_18
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
23890377
NCBI-ProteinID:
XP_012048396
UniProt:
J9VIM5
LinkDB
All DBs
Position
3:complement(1141824..1145994)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSSKADSPKKKPVSKSDKPAGKDIRGFFTPGNSQKTSVTKQVATKTGSGKKPITINDSDD
EPEEVAKTQSSSKAGPPSSAPNSTASKHCGSKAIVLSSDDEPAPARSKSVAKSAPRATSR
PVVTRKPALAKRKILSDSESEEENYKPQPKRQSLGGRDGKKSDDEGTKSIKKGKRKNDDN
FDPMDVDNEDEYNFDDEDEPREKSKPKPIAKKSPAVPKKSTPVTKPAASKISKMEEEEPE
KKEEKKFNWRAAAAARAAGPKAPGSKEIPEGAPDCLAGLTFVFTGEMESLGREDAQELVR
RYSGKVTTAPSGKTSYVVVGENAGVSKLNKVKEKKIPMINEDEFLELIRQRSSGKGPGGA
VDRAAMEKATKAREKEEKKILEQAKEMEEREKKEEKERLRKQKALEGQGMAIKKTGPASA
QLWTTKYAPTSLKEICGNKAPVERLGQWLQDWQKNYKANFKKPGKDGMGVYRAVLISGPP
GIGKTTSAHLMAKEAGYIPLELNASDTRSKKLIENETNVDNKSLDGFFKGQGVGEINAAG
LKIDSRTCLIMDEVDGMSAGDRGGVGALNTLIKKTKIPMILICNDRTLQKMKPLQSTTFN
MTFRRPQPNEIRSRIMSILHKEKLKIPPNVVDELVKGVNSDIRQVLNMLSTFKLGKSEMN
FDEGKHLVKVNEKNTIMTPFTIIDKLTGPYAFSKNSKETLGDRMELYFHDFSFVPLFMQE
HYLKTNPTALNNLDGPEKNLKHLELVSKAADSISDGDLIDRMIHGSEQHWSLLPLHAVAS
TVKPAMHVYGAMRSQGGGWGSWGPAFPQWLGQNSKQNKLQRQLTDIQIRMRLRVSGSREE
IREQYMPLLASKIVSPLIDRGAAAVEETIEYMDEYYLGKDDWDAFVELGVDTMRDEDILK
KIPSATKASFTRQYNKTDHPIAFHKGDMFAGAKKKIDTGPVPDNEDVFEEDEPVPDEPEE
DKSEEEDPLQDKLVKAVKPKGKAAGKSASKPTAAKGAKSKAKK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaaagcagactctcccaagaagaagcctgtcagcaagtctgataagccggct
ggcaaggacattcgtggtttctttactccaggaaattcgcagaagactagtgtaacaaag
caagtagcaactaaaaccggctcaggcaagaaaccgattacaattaatgacagcgacgac
gagcctgaagaggtcgccaagacgcaatcatcttccaaggctggtcctccttcatctgca
ccaaacagcactgcatcaaagcattgtggatcaaaagcaattgtgctctcttcggatgat
gaacccgcgcctgccagatcaaaatctgtcgccaaatccgcacccagggctacttccagg
ccagttgtgacacgaaaacctgcattggcaaagcgcaaaatccttagcgactctgagtct
gaggaagagaattacaaaccgcaaccgaagagacaaagtctaggaggaagagatgggaag
aaatctgatgatgaaggcacgaagagcatcaagaagggaaaaaggaagaacgacgacaat
tttgatccgatggatgttgataacgaagatgagtataattttgacgatgaagacgagccg
cgggaaaagtccaagccaaaaccaattgcaaaaaagtctcctgctgttcctaagaagtcc
acaccagtcacgaaaccggccgcatctaagatttctaagatggaagaggaagaaccagag
aagaaggaagaaaaaaagtttaactggcgagcggctgcagcagcgcgtgctgctggtcct
aaagctccgggatccaaagaaatccctgagggtgcccctgactgtcttgcaggcctcaca
tttgttttcacaggagagatggagagcctgggaagggaggatgcgcaggagctcgtcaga
cggtattctggtaaagttaccacggccccttctgggaaaacttcttacgtcgtagtcggc
gaaaacgctggtgtctccaaactcaacaaagtcaaggagaagaaaattcctatgattaac
gaagatgaattccttgaacttattcgtcaaagatcttctggcaagggacctggtggagcg
gtggatagggcggctatggagaaagcgaccaaggcaagggagaaggaggagaagaagatc
ttggagcaggctaaagaaatggaagagagggaaaaaaaagaggaaaaggagagattaagg
aaacagaaagctctggaagggcaaggtatggctatcaagaaaacgggtcctgcatcagcc
cagctgtggacgaccaagtatgctcctactagtttgaaggagatttgcggcaacaaagct
cctgttgaacgtctgggtcaatggctgcaagattggcaaaagaattacaaggcaaatttc
aagaaacccggcaaagatggtatgggtgtttatcgcgctgttctcatttctggtcctcct
ggtataggcaaaacgacctctgctcatctaatggcaaaagaggccggttacattccgtta
gaactgaacgcgagtgatactcgaagcaagaagctaatcgagaatgaaacaaatgtcgat
aacaagagtttggatgggttcttcaagggtcagggggttggtgagataaatgccgcgggg
ttgaagattgactctagaacctgcttgattatggacgaagtggatggaatgtccgcgggt
gacagaggtggtgtcggcgctttgaacaccttgatcaagaagactaagatcccaatgatt
ttgatctgtaacgatcgcacattacaaaaaatgaagcccttacagagcacgactttcaac
atgactttcaggaggccccagccaaatgagattcgctcaagaattatgtctatcttgcac
aaggaaaagctcaagattccacccaacgtcgttgacgagcttgtgaagggggtcaattct
gatatccgtcaagttctgaacatgctctccacgtttaagcttggtaaaagtgagatgaat
tttgacgaaggaaagcatttggtcaaggtcaatgagaagaacacaatcatgacgcctttt
actatcatcgataaactcacaggcccatatgctttctccaaaaatagcaaagaaacgttg
ggtgatagaatggagctatacttccacgatttcagctttgtgcctcttttcatgcaggag
cattacctcaaaacgaaccctactgccttaaacaaccttgacggtcctgagaagaacctc
aagcaccttgaattagtatccaaggccgcagactcaatatccgacggtgatttgattgat
cgcatgattcacggctcggagcagcattggtctctgttaccgctacatgctgtagcttcc
acggtaaagcctgccatgcacgtgtatggtgcaatgaggagtcagggtggcggttggggc
agctggggtcctgctttccctcaatggctcgggcaaaactcgaagcagaacaaacttcaa
agacagcttacggatattcagattcgtatgcgtttgcgagtgtcaggaagcagagaagag
attagagagcagtacatgcctctcttggccagcaagattgtatctcctctcattgatcgt
ggtgctgcggcggtggaagagacgattgagtatatggacgaatattatcttggcaaagac
gattgggatgcgtttgtcgaacttggtgtcgatacgatgcgggatgaggatatcttgaag
aaaatcccaagcgccacgaaggcgtccttcaccagacagtacaacaagactgatcacccc
atcgcgttccacaagggtgatatgtttgcgggagcaaagaagaagattgatactggacca
gtgcccgacaatgaggatgtttttgaagaagacgagcctgtgccggatgaaccggaggag
gataagagcgaagaggaggaccctttacaggataaattggtcaaggctgtaaagccgaaa
ggtaaagccgcgggcaagtctgcatcaaaaccgacggcagccaaaggagcaaagtcaaaa
gctaagaaatag
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