Cryptococcus neoformans var. grubii H99: CNAG_07676
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Entry
CNAG_07676 CDS
T08175
Name
(RefSeq) ATP-dependent RNA helicase DBP2-A
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_07676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cng03041
]
CNAG_07676
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_07676
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNAG_07676
Spliceosome [BR:
cng03041
]
Complex A
U1 snRNP components
U1 related factors
CNAG_07676
Complex B
CNAG_07676
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
Pre-60S particles
Helicases
CNAG_07676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
DUF2443
Motif
Other DBs
NCBI-GeneID:
23890500
NCBI-ProteinID:
XP_012050393
UniProt:
J9VPI4
LinkDB
All DBs
Position
7:complement(1033736..1037021)
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AA seq
537 aa
AA seq
DB search
MSYGGGYGGGGYGGGYGGGGGGYGGGGGYGGGYGGGGGYGGGFGGDRMGNLGQGLHNIDW
QNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIM
SEIRRMGFTAPSSIQCQAWPMALSGRDVVAIAETGSGKTISFCLPAMVHINAQPLLAPGD
GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPG
RLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEV
QRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIF
VATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDV
RDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADI
PPELEEMAMYGGRGGGGGRGRGGRGGGRGGYGGGGRGGYSSGANSYGGGGGGYSSRW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggcggctacggcggcggtggttacggtggtggctacggcggtggtggt
ggtggctacggtggtggcggcggctacggcggtggctacggtggtggtggtggttacggt
ggcggtttcggtggcgaccgaatgggcaaccttggtcagggtttgcacaacattgactgg
caaaaccagtctcttgccaaatttgagaagaacttctacgtccaggacccccgagtcact
gctcgttccgatgccgaggtcgaggccttccgtgccgagaaggaaatgaagatccaaggc
aagaacgtgcctcgacccatcaccacttttgaggaggccggtttccccgattacatcatg
tctgagatccgacgaatgggtttcaccgctccttcttctatccagtgccaggcttggcct
atggccttgtccggtcgtgacgttgtcgccattgccgagactggttctggtaagaccatc
tctttctgccttcctgcgatggtccacatcaacgcccagccccttctcgcccctggtgac
ggtcctatcgttcttatccttgctcctacccgagaactcgctgtccagattcagactgaa
gctaccaagtttggtcagtcttcccgaattaggaacactgccatttacggtggtgctccc
aagggccctcaaattcgagacctccagcgaggtgttgagatctgtgtcgccactcccggt
cgattgattgacatgctcgagactggcaagaccaacctcaagcgtgttacttacctcgtt
atggacgaagccgaccgaatgctcgacatgggtttcgagccccagatccgaaagattgtt
tctcagatccgacctgaccgacagactcttttgttctctgccacttggcccaaggaggtc
cagcgtcttgccatggacttcctccacgacttcatccaggttaacattggttctcttgac
cttactgccaaccacaacgttgcccaacacgtcgaagtctgcactgactttgacaagcga
agcaagctcctcagccatttggagaagatctctcaggagaacggcaaggttcttatcttc
gttgctaccaagagggtcgccgatgacttgaccaaattcttgagaatggacggctggcct
gcacttgctatccacggtgacaagcaacaagctgagcgtgactgggttcttgccgagttc
aagtctggccgaagccctattatgcttgccactgacgttgcttctcgaggtctcgatgtc
cgagacattggttacgttatcaactatgacttccccaacaactgtgaagattacattcac
cgaatcggccgaactggtcgtgccggtcgaaagggtacttcttacacttacttcaccatg
gacaactccaaagctgctcgtgaactcgtccagattttgagagagtctaaggctgacatc
cctcccgagcttgaggaaatggccatgtacggcggtcgaggaggtggtggtggtcgaggc
cgaggtggccgtgggggtggccgaggtggttacggtggcggtggccggggcggctacagc
tctggcgccaactcttatggtggcggtggtggtggttactctagcaggtggtaa
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