Cryptococcus neoformans var. grubii H99: CNAG_07957
Help
Entry
CNAG_07957 CDS
T08175
Name
(RefSeq) WD repeat and SOF domain-containing protein 1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cng03009
]
CNAG_07957
04121 Ubiquitin system [BR:
cng04121
]
CNAG_07957
Ribosome biogenesis [BR:
cng03009
]
Eukaryotic type
90S particles
Other 90S particles
CNAG_07957
Ubiquitin system [BR:
cng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CNAG_07957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SCAP
Cytochrom_D1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
23890762
NCBI-ProteinID:
XP_012047090
UniProt:
T2BQF4
LinkDB
All DBs
Position
1:complement(1572040..1574017)
Genome browser
AA seq
506 aa
AA seq
DB search
MKIKTISRSLDDHLPSSSTAPHPLSHNLAPHLHPFAKPREYTRAVTAVKMDRMFAKPFVD
ALGGHQDGVYCLGKDSRRAGVVAGGGGDGEVIVHSLGLRRPLLKIPGAHRGMVSGICWTS
EAQDRRRGLITCGKLDGTIKLWRSEAFAPGLRDKDAFQGNEFGLGQGEGSGFLDQAGAIG
ESGYDEEEGGGLSLDSAKRDALGQNLEPTMTFTSKNGLNSIDHHRTDAVFATASNTVQIW
DEQRTAPLSTLQFGSSMETVSGVKFNQSETSVLASVGNDRTMCLYDIRTGKAERRIVTQF
TSNCLSWCPTLPTLLLLGSEDHNLYTFDIRNLETPNQIYKGHVGGVMGCDWSPTGEGFVS
GSYDRTVRLWNREEGKSRDVYHTKRMQRVFDVSYTPTADFVLSASDDGNVRIWKSDASKK
LGPVSTKERQAIEYRQKLVERYSREKGVREVKERRHVPQSIHNATKLKREMIEARNIKED
RRRKHSRAGREKPKAERKKTVVVEQR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaaccatctctcgctctctggacgatcatctcccctcttcctccactgct
ccccatcctctctcgcacaacctcgcaccccatctccaccccttcgcaaagccaagagaa
tacacacgtgctgtaactgccgtaaagatggaccgcatgtttgctaaaccttttgttgac
gctcttggtggtcatcaagacggtgtctactgtctgggtaaggactcgagacgggctggt
gttgttgccgggggagggggcgatggcgaagtcattgtacattctttgggcttgaggagg
ccattgctcaaaataccaggagcccatagaggtatggtcagtggtatatgctggacgtct
gaagcgcaagaccgtcggagaggactgatcacctgcggcaaacttgacggcaccatcaaa
ctttggcgaagcgaggcgttcgctcccggtttaagagataaggatgcttttcagggcaat
gagtttggtcttggacaaggtgaaggaagtggatttttggaccaggccggagcgattgga
gaaagcgggtatgatgaggaggaaggcggaggcttgtcgcttgattcggcaaagagggat
gcgttggggcaaaatctagagcctaccatgactttcacatccaagaacggtttaaacagt
atcgatcatcaccgtacagatgcggtatttgctactgcttcaaacactgtgcagatctgg
gacgagcagaggacggcaccattaagtacacttcagtttggaagctcgatggagacggtg
tctggcgtcaagttcaaccagagcgagaccagtgtgttggcgagtgtgggtaatgacagg
acaatgtgtttgtacgatattcgaacgggcaaggccgagagacgtattgttacacagttc
acgtccaattgcctctcgtggtgtcctactctccccacccttcttcttctcggctcagaa
gatcacaacctctacacatttgacattcgtaacctcgaaactcctaatcaaatttacaaa
ggtcacgttggtggtgtcatgggatgcgactggagtccgacgggcgaaggatttgtctct
gggtcctatgacagaactgtgcggttatggaacagagaggagggcaagtcaagggatgtc
taccacaccaagcggatgcagagagtattcgacgtcagctacactcctactgccgacttt
gttctctccgcgtcggatgatggcaatgtgcgcatatggaaatcggatgcgtccaagaaa
ctcggcccagtttcgaccaaggagcgtcaagctatcgagtaccgacaaaaacttgtggag
agatacagccgggagaagggagtcagggaagtcaaggagaggaggcatgtgccgcagagc
atccacaatgcaacgaagctgaagagggaaatgatagaagcgcggaatatcaaggaggac
aggaggcggaagcactcgcgtgctggacgggagaagccgaaggcggagaggaagaagacc
gtggttgtggagcagcggtaa
DBGET
integrated database retrieval system
