Cryptococcus neoformans var. grubii H99: CNAG_07978
Help
Entry
CNAG_07978 CDS
T08175
Name
(RefSeq) hypothetical protein
KO
K20306
trafficking protein particle complex subunit 9
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cng04131
]
CNAG_07978
Membrane trafficking [BR:
cng04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
CNAG_07978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
DUF6003
Motif
Other DBs
NCBI-GeneID:
23890783
NCBI-ProteinID:
XP_012049666
UniProt:
T2BNT5
LinkDB
All DBs
Position
5:complement(55333..61836)
Genome browser
AA seq
1822 aa
AA seq
DB search
MSLDTPLSPLADPFSLAKLQVLLVPVHAHAPISKSTFHHYTKVIKGHQTLRTDELVPPFH
PELPRGGGPNPRLKFFPHLTSPGGYGGYGSNGGGGGSGHQVHLTYTHSPPAKHLYPLSLF
RISEFPLVVIGIAVDGGEDTLSRTQKDQEVEGYKLSRGEEMEGDIGEGEATPTLPRWFDP
SESKPASSQVTPETAFDHTLSSLFPSTSPFPLVKRLVVVPNPSLGAHASKERKDKREGEV
WYAPQEGLGQWMTQLVGGAVGDALGELGVIAASLETPSGLQTLSSTILPSLTCLPPPSSS
AGTVGNSDNSFFPHSRSKTPNSYISTDSTTSSTSRSTPTIAGDVIGKVRCITPGGIPSSA
ATAGAGVTPTQLPIEFPFPIHITNPTSSSASHTTSTSSSALGSSPINTSATGRPSSMISS
SSSSLTNPFRRSLAVSSPFSRSSSSASMAGNGSPASSSLTITGGVGGVSPGVSPSPSPSP
SPAPTYGPKSSHPLSRYTSLPLPSFSSSTSTDPAIPPVAIGRLLKIIADFLLLSGLFSDS
IVLYDEAIQRCKEARDVLWEAAGREGRAVAGIEEGWGWRGGGTQTQPFPSSPIPNEIFSQ
FVAALGCISSAPLLFPESSPEFDAGSGSESGPQQKAGRGAHLLAYLYAALALRSAHFLLI
VWAAGGWGEVALGCLVRHELPRSFLPPIPHTSALSSVSPAHATSTSMYAQEEKRRSHLRV
LSASSQIPRHFILSLARLATSAPILRCLQWSSSADSGSSSDSSGVEEVVVWREVGWIARL
VGMERKEGWIGGMIGEAVVGMLSAATANGDGNGAGAREGRDGKARRVRSGTVMTNSNANT
TSMVGTADKEDRRLSTMSQASSSSQTTQTTQTTQASQTDTDPASASASVGLGLGMSVPIS
SAHTTTSETDSQTRPGSGGITIRRKEVTQGNAGIFSILSQQAKVLGIEVLRDVFPVERSV
SVLWPPAGSGRGGNKGKDKGRGLSSGGIVGVDDELGVGFAATGVEDFGWASLKLEFLKKS
ITLLGNLPDHPNTVRLALIALHLLPSLSHRLALQSGSRVDGGTQMVLNRVYIAALGVMKR
RRLGVYGTDGRGEVGWWVPGRVVVSLEVASLPKNKYPTRHSTAELVSQTTGSNGMGSKMD
GKGQGAKRDPFLYNPRTSRIGISMGDKTVLVANEPIEVFVTLRNPFAFPMNIKDMSIITS
GVPLHSQSYEVSIPALSIQTVRLSALAPGPGIVQIRGISLRLSDGSAGDFYLPLLDVKEC
EKRERQCQKQRIRCRDAKRSGMDQRTAWEKEIMMNEERVREEKENLESLKWLECEVVAPL
PLAWIKSTSLTHGMVMLYNGETSTIQITLENASPIPINYLKLSFEDSTVRAATRIAQDNE
LGAEEAYELDWDVRNRSVFTWENPVTLGAGEGEEGLIIPGGRKVLKIKCLGKVGCTEGLV
RIDYGHVHSSSLGSTQTDDAGFLTPTTPSATFYTRQITFPVLFTVTHTLECHSLDITHLG
HCANNGLSAPELNDTNKLEIQEEDNDDLRKALTGENNSAHCLVGLSVANVYGVPFEVCLS
RKGKRAESEDIECRRLIPPGATERLIVPIPRKSIPQDTLSQPIPSFSERQYVVDKEKKSA
SRIALERELFWYREALLDMLDLTWTEPGSQRHGSLILRNQILTPSLLQVFRADAVDIRVI
LRGRGKDGDVRTMDFVDLVVEVTNNLERPYRPYISLACLPTSSTDYSWARPTSIYRPPPT
EQHSHAHPHRNVLFDSYPAGTLTMLQKGEKDVYEVGTTFLASGKYGFRASVEEIKRKDEE
GDVEQVEGKKVWFSPVLQVQVV
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagatacaccattgtctccccttgcggatcccttctcacttgccaaactccaa
gtccttttggtccccgtccacgctcatgctcccatctccaagtccacgttccatcactat
accaaggtgatcaagggacaccagacacttcgcactgacgaactcgtccctccctttcac
cccgaattgcccagaggcggaggacctaatccgcgattgaagttcttcccacatctcact
tcgcctggaggatacggaggttacgggtcaaatggaggtggaggcgggagtgggcatcag
gtccacttaacgtacactcattccccgccggcaaagcatctttatcctctttcgcttttc
aggatatcggagttccctttggtggtgattggtatagccgtggacggcggcgaggatact
ttgtcacggacgcagaaggatcaggaggtggaagggtataaactgtcgagaggagaagag
atggaaggtgatataggagaaggcgaggctacaccgacactacctaggtggtttgatcct
tccgaatctaaacctgcttcatcgcaagtcacccctgagacggcattcgatcatacactc
tcttctcttttcccatccacttccccatttcctctcgtcaagcgtcttgtcgtcgttcca
aaccccagtctcggtgcgcacgcgagcaaagagaggaaggacaaaagggaaggggaagtg
tggtatgctccccaggaaggtttggggcaatggatgacccagctggttggaggagctgtt
ggtgacgctcttggagaattgggtgttatcgctgcatctctcgagactccatcgggttta
cagacactttcatcgaccatcctcccatctcttacttgtctgcctcccccatcatcgtca
gctggaacggtcgggaattcagacaacagcttcttcccccattcgcgatccaaaacaccc
aactcttacatttccaccgattctactacttccagcacgtccagatccactccgacaata
gcgggcgacgtaattggtaaagtccggtgtatcaccccgggtggcatcccctcttctgct
gctactgctggggctggggtaactccaactcaacttcctatcgaatttcccttccccata
catatcaccaatcccacctcttcttccgcttcccacaccacatctacctccagctccgcc
ttaggctcctctcccatcaacacctcggccacgggcaggccaagttcgatgataagttct
tcatcgtcatccttgactaacccctttaggagatcgttggcggtgtcatcaccgttttcg
agaagtagttcttcggcgagcatggcaggtaacgggtcgcccgcgtcttccagtttgacc
atcactggaggagttggcggggtttcgccaggagtatcaccttcgccttccccatccccc
tctcctgcacccacttacggtccaaaatcctctcatccactttccaggtacacttccctg
cctcttccctccttctcctcatccacctccacagaccccgccattccgcccgtcgccata
ggccgtctcctaaagattattgccgactttctcctcctctccgggcttttctcagatagt
atcgtcctctacgatgaagcgattcagcggtgtaaggaagcgcgggatgtgctttgggaa
gccgcagggagggagggaagggctgtggcgggtatagaggaggggtgggggtggagaggt
ggggggacccaaacacagccattcccctcatctcccatccccaacgagatcttctcccaa
ttcgtggctgctctaggatgtattagctcagcgcctttgctcttccccgaatcctccccc
gaatttgatgcaggatcaggatcagaatcgggaccgcagcagaaggcaggccgcggggcc
catctcctcgcctacttgtacgctgctctcgcgcttcgatcagctcattttttgttgatt
gtttgggcggcgggcggatggggagaggtggcgttgggttgtttggtgaggcatgagtta
ccgagatcgttcttacctcccatcccccatacttccgccctgtcctctgtatcccctgcc
cacgccacctcaacgtcgatgtacgcccaagaggaaaaacggagatcccatctccgggtc
ttatcggccagctcccaaatcccgcgtcatttcatcctttccttagcacgtttagcaact
tccgctcccatcttacgatgtctacagtggtcctcttccgcggactcgggttcatcttcg
gactcatctggggtagaagaggtggtagtatggagggaagtggggtggatagcgcggttg
gtagggatggagaggaaagaaggatggataggggggatgattggggaggcggtagtggga
atgttgagtgccgcgactgcgaatggggacgggaatggtgctggagcgagggaagggagg
gatggaaaggctcgaagagtacgttccggtacggtaatgacgaactcgaacgccaacacg
acgagcatggtgggcacggcggataaggaggatcgacgattatcgaccatgagccaagcg
agttcaagcagccaaacgacccagaccacccaaaccactcaagctagccaaactgatacc
gatcctgcttctgcgtctgcatcggtaggcttaggtcttggtatgtccgtccccatctcc
tccgctcacacaacaacatccgaaaccgattctcaaaccagacccgggagtggaggaata
acaatccgccggaaagaagttactcaaggaaacgccggtatcttttccatcctttctcaa
caagcaaaagtcctaggaattgaagttttgcgggacgtattcccggtcgagaggagcgtg
tctgtcctttggccacctgcaggttcaggtcgaggtggcaataaagggaaagataaggga
agagggttgtccagcggaggtatagtgggggttgatgacgagcttggtgtaggttttgcc
gcaactggggttgaagattttggatgggcgagtttgaaacttgagtttttgaagaagagt
atcactctacttggcaacttgcccgaccatcctaacactgtccgtcttgcgctcattgct
ctccatcttctcccttcgttatctcatcggttggctctgcaatccggatctagagtggac
gggggcacgcaaatggtgttgaatagagtgtacattgccgcgttgggtgtgatgaagcgc
cgtaggttgggagtgtatggaacggatgggagaggagaggtgggatggtgggtcccgggg
agggtggtggttagtttggaagtagcgagcttaccaaagaataaataccccacacgacac
tcaacggcggaattggtctctcaaactaccggtagcaatggcatgggaagcaaaatggat
ggaaaggggcaaggtgccaagcgggatccgttcttatacaaccctcgaacaagtaggatt
gggattagtatgggtgacaagactgtgttagtagcaaacgagccgatcgaagtctttgta
acgttaaggaatccgttcgctttcccaatgaatatcaaggatatgtctattataacatcg
ggcgttcctctccacagccagtcatacgaagtatccatccctgccttatctatccaaacc
gtccgcctctccgccttggcacccggccccggcattgttcaaatcaggggtatttccctt
cgtctctcggacggttccgccggagacttctatcttccccttttggatgtcaaggagtgt
gaaaagagggaacgacaatgtcaaaagcaacgaatacgatgtcgagatgcgaaacggtca
ggaatggaccaaaggaccgcgtgggagaaagaaattatgatgaatgaagagagggtgagg
gaagaaaaggaaaacttggagagcctgaaatggttagagtgtgaggtagtggcgccgttg
ccgctggcttggataaagagtacaagtttgacgcacggaatggtgatgctgtataacggt
gaaacctcgacaattcagatcacattagaaaacgcgtcccccatccctatcaattacctt
aaactttcgttcgaggattctactgtccgagcggcgacgaggatagcgcaagataacgag
ttgggagcggaggaggcgtacgagttggattgggatgtgaggaataggagtgtttttacg
tgggaaaatcccgtgactctaggtgccggggagggggaggaaggtctcatcataccgggt
ggaaggaaagtgttgaagataaaatgtcttggtaaagtaggatgtaccgagggactcgta
cggattgactatggccatgttcattcttcatctctaggttcgacccaaacggacgatgcc
ggcttccttacacccacaaccccatccgcaaccttctacacccgacaaatcacattccct
gtgctattcacagtgacgcacaccctcgaatgtcactctctcgacatcacccatctcggt
cactgtgcgaataatggtctctctgccccagaacttaatgacactaataagctcgagatt
caggaggaagataatgatgatctgagaaaggcattgacaggcgaaaacaattcggcgcac
tgcttggttgggctgagcgttgcgaacgtatatggcgtaccatttgaagtatgcttgtcc
cgcaagggcaaaagagcagagagcgaagatatagagtgtagacggcttattcctccagga
gctactgaaaggttgatcgttcctatacctcgcaaatccatccctcaagacaccctttct
caaccaattccttccttctcagaacgacaatatgtggtagacaaggagaagaaatccgct
tctaggattgctctggaacgcgagcttttttggtaccgcgaagcgttattggatatgctt
gatttgacgtggacggaacccggatcgcaaagacatggtagccttatactccgaaaccaa
atcctcactcctagtttacttcaagttttcagagctgacgctgttgacattcgtgtgatt
ttgcgaggacgagggaaggatggcgatgtacgaacaatggattttgtcgatcttgtggtt
gaggtgactaataacttggaacgcccttaccgtccttacatcagtctcgcatgtctccct
acgtcctccacagactattcttgggctcgtccgacttccatttaccggccccctcccacg
gaacaacattcacacgcacaccctcatcgaaatgtcttatttgatagttacccagctggt
actttgacgatgttgcaaaagggcgagaaagatgtttacgaagtgggcacgacgttctta
gctagtgggaagtatggcttcagagcttcagttgaagagatcaagagaaaagacgaagaa
ggggacgttgaacaggttgaagggaaaaaggtctggttttcgccagtgttgcaagtccag
gttgtctaa
DBGET
integrated database retrieval system