Caloenas nicobarica (Nicobar pigeon): 135984602
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Entry
135984602 CDS
T11056
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like isoform X1
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cnic00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cnic01100
Metabolic pathways
Module
cnic_M00068
Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
135984602
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
135984602
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cnic01003
]
135984602
Enzymes [BR:
cnic01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
135984602
Glycosyltransferases [BR:
cnic01003
]
Glycan extension
P blood group
135984602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
135984602
NCBI-ProteinID:
XP_065483158
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All DBs
Position
1:77388546..77419965
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AA seq
395 aa
AA seq
DB search
MSIPACKISTWMEPKGKITTVVLGEQALTGARLPRMSNCLPKLTTVLPSHRPGALFILTI
LFLFIASVLFYQRTGKDAEGQLYSSPTQNMCEQFLTSPPHTITGGPSPSPGDVFFVETSE
QTNPSYLFTCSVESAARAHPGTQVVVLMKGLAKGNVSLPNHWAFSLLSHFPNVEIRPLDL
AELFSGTPLAKWYSQPEHQKEPYFLPVLSDACRITIMWKFGGTYLDTDFIVLKNLKNLTN
ALGLQSQDVLNGAFLSFKPKHEFMELCMQDFVDNYNGWIWAHQGPGLLTRVFKKLCSINN
IRNGMICKGVSALPPEAFYPIPWQDWKKLFEAISSSELLNLLKNTYAVHVWNKLSHDARL
EITSQALLAQLYSRSCPATFAQMKKDSEEQSRPVM
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccatacctgcatgtaagataagcacctggatggagcctaaaggaaagatcacaacg
gttgtgctgggagagcaggctctgacgggagcgagactgcccaggatgtccaactgcctg
ccaaaactgaccacagtgctgccgagccacaggcctggggctctgttcatcctcaccatt
ttgtttctcttcattgcctctgttctgttctaccagaggactgggaaggatgctgagggc
cagctctacagctcacctacacagaacatgtgtgaacagtttttgacttctcctccccac
accattaccggtgggccctctccttccccaggggatgtgttttttgtggagacctctgag
caaactaacccaagttacctgttcacgtgctctgtggagtcagcggcccgggcgcaccct
gggacacaggttgtggtgctcatgaaaggcctggcaaaggggaatgtctcattgcccaac
cactgggcattctcattgctgagccacttccccaatgtggagatccggcccctggacttg
gcagagcttttctcaggaacacctctggcaaagtggtactcgcagcctgagcaccagaag
gagccttatttcttacctgtcctgtctgacgcctgcagaattaccatcatgtggaaattt
ggtggcacctacctggacacagacttcattgtgctgaagaacttgaagaacctcaccaac
gcccttgggctccagtctcaggatgtactgaatggagccttcttgtctttcaaacccaag
catgagttcatggagctttgcatgcaggactttgtggacaactacaatgggtggatctgg
gcacaccagggcccaggactcttaacacgtgtcttcaagaagctgtgctccatcaataat
atccggaatggtatgatctgtaaaggagtgagtgctctgccccctgaggctttttatcct
attccatggcaggactggaagaaattgtttgaagcaatcagctcctcggagcttctcaat
ctccttaagaacacttacgcggtgcacgtatggaacaaactgagccacgatgcaaggcta
gagatcacatcccaggctttgctggctcagctgtattctcggtcctgccctgccacattt
gcacagatgaagaaggactctgaagagcagtcaaggcctgtaatgtga
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