Caloenas nicobarica (Nicobar pigeon): 135985388
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Entry
135985388 CDS
T11056
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135985388 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cnic04050
]
135985388 (TNFRSF11A)
04090 CD molecules [BR:
cnic04090
]
135985388 (TNFRSF11A)
Cytokine receptors [BR:
cnic04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
135985388 (TNFRSF11A)
CD molecules [BR:
cnic04090
]
Proteins
135985388 (TNFRSF11A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
AI-2E_transport
Tetraspanin
CrgA
Motif
Other DBs
NCBI-GeneID:
135985388
NCBI-ProteinID:
XP_065484752
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Position
2:complement(78275160..78303118)
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AA seq
667 aa
AA seq
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MPVPSGCWLLLLCLAAAGKQLSLQITPPCESEQHYEYSGRCCTKCEPGKYLSARCTGTSD
SVCQPCGPNEYMDVWNEEDKCLLHKICDQGKALREVNPGNSTFQRQCACTMGYHWDEDCD
CCQRNTVCAPGFGVKHPVQQDKDTMCAPCPRGYFSKVASSTDKCKSWTNCTALGMAEIAP
GTDKSDAVCADRKVPEPSEDGTNRILYVLIVILFFVALIGIVIFIIYYKNKGKKLTADLQ
NWANEVCSQIKGTQERSRDVTVNITNAAVPRTSEDMCLLGPTGPPAPGSLCCTGGHAPCR
NGSPSTAPCEAGGSLPELSVVSKTDDDDHFPPVPTEDEYMDKDLNTTDYLSLLRPTASKT
VSSFSEPMEAGENDSLNQYFSGIGSTEDISVSQGFHPSSDAGGAHTATDKLLQKSCQQGH
SCLKETGNKDTDHFATNYDSEKICVRCGVSYRESPKKWSKPCCAAADGASTSPGTGSNAR
CTCGLNFLSAGQSNLASDHSVEDASSDSANMKYQNTNRSTSGTNRSTSGTNSSTSDLPSA
SGNVTGNSNSTFISSGQVMNFKGDIIVVYLSQNSQEGTAASGPSEENVGSPVQEENLSRC
ETFAGNTQHYKEKCAELQGSCPLAGSGGPRWPPGALPQERGLSRHGQASQPVQEEGKLGH
FSEKVLN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcccgtcaggctgctggctccttctcctctgcctggcagccgctggcaaacag
ttgtcactacaaatcactccgccgtgtgaaagcgaacaacactatgaatactctggacgg
tgctgcacaaagtgtgagccaggaaagtatttgtctgctagatgcactggtacttctgat
agcgtgtgccagccgtgtggcccaaatgagtatatggatgtctggaatgaagaagataaa
tgcttactacataaaatatgtgatcaagggaaagctttgagagaagtgaacccagggaac
agcacgttccagcggcagtgcgcttgtacgatgggctaccactgggatgaagactgcgac
tgctgccagcgaaataccgtatgtgctccaggattcggagtcaagcatcctgtgcaacaa
gacaaggacacaatgtgtgcaccatgtcccaggggctacttttcaaaggtcgcttcatcc
accgacaagtgtaaatcctggaccaactgtacagctctaggaatggcagaaatagcaccc
gggactgacaagtcagatgcagtttgtgcagaccgaaaggtgcctgagccatcggaagac
ggaacaaacaggatcttatacgtgttgattgtcatcttgttttttgtggcactaattggc
attgtcatcttcatcatatactacaagaataagggaaaaaagctgacagcagatctacag
aactgggctaacgaagtgtgcagccaaataaaaggaacacaggagcgctccagagacgtt
actgtgaacatcacaaatgctgctgtcccccggacctctgaagacatgtgcctcctgggc
cccacgggccctcctgcccctggaagcttgtgctgcaccggtggtcacgctccttgcagg
aatgggagccccagcacggcgccgtgtgaggcaggagggagcctcccagagctttctgtg
gtaagcaagactgacgatgacgaccatttcccaccagttcccacagaagatgaatacatg
gataaggatctcaataccactgattatttatctttactgcgtccgactgccagtaaaacc
gtatcatcattttcagaaccgatggaggcaggggagaacgacagcttaaatcagtacttt
tctgggattgggagtacagaggacatatcagtctcccaaggctttcacccttcctctgac
gcaggtggggcacacactgccacggacaaacttcttcagaaatcttgccaacagggccac
agttgcctgaaggaaacgggcaacaaagacacagatcattttgcaacgaactatgactca
gaaaagatctgtgtgaggtgtggcgtttcatacagggaatctcccaaaaagtggagcaaa
ccctgttgtgctgcagctgacggggcctccacctccccaggaactggatccaatgcacgg
tgcacttgtggcttgaattttctctctgctggtcagagcaatctagcaagtgatcacagt
gtggaagatgcatcttcagatagtgccaacatgaagtaccagaacacaaacagaagcact
tcagggacaaacagaagcacttcagggacaaacagcagcacttcagacctcccttcagca
tctggaaatgtgactggaaacagtaactccacctttatctcaagtggacaagtaatgaat
ttcaagggcgacatcattgttgtctaccttagccagaactcccaggaggggacggcggcc
tcgggcccgagtgaggagaacgtgggcagccccgtacaggaggaaaacctcagccgctgc
gagacttttgccggcaacacccagcactacaaggagaagtgtgccgagctgcagggcagc
tgcccgctggcggggagcggggggccccggtggcccccgggagccctgccccaggagcgg
ggactgtcccgccacggccaggcatcgcagcccgtgcaggaggaggggaagctgggacac
ttctcggagaaggtgttgaactga
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