Caloenas nicobarica (Nicobar pigeon): 135987403
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Entry
135987403 CDS
T11056
Symbol
MTR
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00270
Cysteine and methionine metabolism
cnic00450
Selenocompound metabolism
cnic00670
One carbon pool by folate
cnic01100
Metabolic pathways
cnic01230
Biosynthesis of amino acids
cnic04980
Cobalamin transport and metabolism
cnic04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
135987403 (MTR)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
135987403 (MTR)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
135987403 (MTR)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
135987403 (MTR)
04980 Cobalamin transport and metabolism
135987403 (MTR)
Enzymes [BR:
cnic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
135987403 (MTR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
IPT
Motif
Other DBs
NCBI-GeneID:
135987403
NCBI-ProteinID:
XP_065488355
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All DBs
Position
3:80342494..80392457
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AA seq
1265 aa
AA seq
DB search
MAPTGPADPDPPADPWKSMEDEIESVLQERIMILDGGMGTMIQQHALSEEDFRGHEFKDH
SRPLKGNNDLLSITQPDIICAIHKEYLLSGADIIETNTFSSTRVAQADYGLEHLAYRLNR
VSAQVARKAADDVTAQTGIRRYVAGAMGPTNRTLSVSPSVERPDYRNITFDELVEAYKEQ
AKGLLDGGVDILLVETIFDTANAKAAIFALQTLFEEEYAPRPIFVSGTIVDKSGRTLSGQ
TGEAFVISVSHSKALCIGLNCALGAVEMRPFIETIGKCTTAYIICYPNAGLPNTFGGYDE
TPEVTAKHIKNFALDGLVNIVGGCCGTTPAHIREIAEAVKFCKPRVLPDLSQGYMLLSGL
EPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSIAKLQVEMGAQVLDINMDDG
MLDGPAAMTRFCNLISSEPDIAKVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEED
FLEKARKIKLYGAAVVVMAFDEMGQATETETKIAICSRAYHLLVEKVHFNPNDIIFDPNI
LTIGTGMEEHNLYAVNFINATKTIKETLPGARISGGLSNLSFSFRGMDAIREAMHGVFLY
HAIKYGMDMGIVNAGNLPVYDDIHKELLQLCENLIWNKDPDATEKLLHYAQNHAQGGKKI
VQTDEWRNSSVEERLEYALIKGIEKYVTADTEEARLNQEKYPRPLNIIEGPLMNGMKIVG
DLFGAGKMFLPQVIKSARVMKKAVGHLIPFMEKEREERRAERGSTEEEDPYHGTVVLATV
KGDVHDIGKNIVGVVLGCNNFRVIDLGVMTPCDKILRAAIENKADIIGLSGLITPSLDEM
IFVAKEMERLAIKIPLLIGGATTSKTHTAVKIAPRYSAPVIHVLDASKSVVVCSQLLDES
VKDDFFEEILEEYEEIRQEHYESLKERRYLSLQQARRKGLHNDWSSGHRPVKPKFIGTKV
FEDYDLERLVEYIDWKPFFDVWQLRGKYPNRGFPKVFNDKTVGEEAKRVYNDAQNLLKTL
INQKKLQARGVVGFWPAQSVEDDIYLYAAEEAVGSSEPIAKFYGLRQQAEKDSACTDPYY
CLSDFIAPLGSGICDYLGLFAVACFGVDELCSEFRKQDDEYNIIMVKALGDRLAEAFAEE
LHERVRREFWAYCSTEQLDLSDLRRIKYEGIRPAPGYPSQPDHTEKLTMWKLANIEETTG
IGLTESLAMIPASAVSGLYFSSPKSKYFAVGKICKDQVEDYARRKNLSVAEVEKWLGPIL
GYDTE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccacggggccggccgaccccgacccaccggcagatccctggaaaagcatggaa
gatgaaattgaatcggttctgcaggagcggatcatgattttggatggcggcatgggtacc
atgatccagcaacatgccctgtcagaagaggatttccgagggcatgaatttaaagatcat
tccaggcctttgaaaggcaataatgaccttcttagtataactcaacctgatataatctgt
gccatacacaaggaatacttgctgtcaggtgctgacatcattgaaacgaacactttcagc
agtacccgagttgcacaagctgactatggccttgagcatttggcatatcggttaaacaga
gtctctgcacaggtggccagaaaagcagcagatgatgtaactgctcagacgggaattagg
aggtatgttgctggagccatgggtccaacaaacaggacactctctgtgtcaccatcagtg
gagagaccagattacaggaatataacttttgatgaactagtcgaagcctataaggaacaa
gccaaaggacttttggatggaggagttgatatcttgttagtggaaaccatattcgataca
gccaatgccaaggcagctatttttgcactccagacgttgtttgaggaagagtatgctcct
cgacccatatttgtttctggaaccattgtggataagagtggacgtaccctctcaggccag
acaggagaggcatttgttattagtgtttcccacagtaaggcactttgtatcggcttaaat
tgtgctttaggggcagttgaaatgcgaccattcattgaaacaattggaaaatgtacaaca
gcctacatcatctgttaccccaacgcaggtcttcccaatacttttggtggttatgatgaa
actccagaggtgaccgccaagcatataaagaattttgctttggatggcttggttaacata
gttggaggttgctgtggtactacaccagcacatatcagggaaattgctgaagcagtgaaa
ttctgtaagcctcgcgttctacctgatctctctcaagggtacatgctgctgtcaggtttg
gagccgttcaggattgggccatataccaacttcgttaatattggtgaacgttgcaatgtc
gcaggatcacggaagtttgctaaactcatcatggcaggcaactatgaagaagccctgagt
atagccaaattgcaagttgagatgggggcccaggtacttgacatcaatatggatgatggg
atgctggatggccctgctgcaatgaccagattttgtaacttgatttcttcagaacctgat
attgcaaaggtgccattatgcatcgactcctcaaatttttcagtgatcgaagcaggtttg
aaatgttgccaagggaaatgcattgtaaacagcatcagtctgaaggaaggtgaggaagac
tttttggagaaagcaaggaaaattaagttgtatggagcagctgtggttgtcatggctttt
gatgaaatggggcaggccacagaaacagaaaccaagattgcaatctgttccagagcttat
caccttcttgtggaaaaagtgcacttcaatccgaatgatataatatttgaccctaatatt
ttgaccataggaactggaatggaagaacataacctgtatgccgttaattttatcaatgct
actaaaaccataaaagaaacactgccgggagccaggataagtggaggtctgtccaatctg
tctttctcctttcgagggatggatgccattcgagaagcaatgcatggggtgttcctttac
catgcaattaagtatggcatggacatgggaattgtgaatgctgggaatctaccagtatat
gatgatatccacaaggaattgctacagctgtgtgagaatctaatctggaacaaagatcct
gatgcaacagagaaacttttacattatgctcagaatcatgcccaaggaggaaaaaaaatt
gtacagactgatgagtggcggaatagctctgtggaggaaaggctggaatatgctctcata
aagggcattgagaagtatgtcactgcagatacagaagaagcaagattaaatcaggaaaag
tatcctagacctctaaatataattgaagggcctttgatgaatggcatgaaaattgttggt
gatctttttggtgctggaaagatgtttctgcctcaggtgataaagtctgctcgagttatg
aagaaagcagttggccaccttattccctttatggaaaaagaaagagaggaaaggagagct
gaacgaggcagcacagaggaagaggatccttaccatggtacagtagtactagcaactgtg
aaaggagatgtacatgatatcggcaaaaacattgtgggagtcgttctgggctgcaacaac
ttcagagttattgatttaggagtcatgactccatgtgataagatattgagagctgctatt
gagaacaaagcagatataattggcctgtctggtctcatcaccccttctttggatgaaatg
atttttgtcgccaaggaaatggagagattggcaataaagattcctttgctgattggagga
gcaactacttctaaaacacacacagctgttaaaattgccccacgatatagcgcacctgta
attcatgtcctggatgcatccaagagtgttgtggtttgctcccagctcttagatgaaagt
gtaaaggatgatttctttgaagaaatattagaggaatatgaagaaattagacaagaacac
tatgagtctctcaaggaaagaagatacttgtctctacagcaagctagaagaaaaggtttg
cacaatgactggtcatcaggccatagaccagttaaaccaaaattcatcggcacaaaagtc
tttgaagattatgacctggagaggctggtagaatacattgactggaagcctttctttgat
gtctggcaacttaggggaaagtatcccaaccggggtttccctaaagtctttaatgataaa
actgtaggtgaagaagcaaagagagtttataatgatgctcaaaatctactgaaaacattg
attaatcagaagaaactacaagccagaggtgtggttggcttctggccagctcaaagtgtt
gaagatgatatctatctgtatgctgcagaagaggcagtgggatcttcggaaccaatagca
aaattttatggcttgaggcaacaggctgaaaaggactctgcctgcacagatccatattac
tgcctctctgacttcattgcaccactgggttctggcatttgtgactacttaggcctgttt
gctgtggcctgctttggtgttgatgagttatgcagtgaatttaggaaacaggatgatgaa
tacaacatcataatggtaaaggctcttggcgatcgcctggcagaggcatttgctgaggag
ctccatgaaagggttcgaagggaattctgggcttactgtagtactgagcagttagatctc
tcagacctacgcagaattaaatatgagggaattcgccctgcccctggatatccaagccag
cctgaccatacagagaaactcaccatgtggaaacttgcaaacattgaggaaacaacagga
attggtttaactgaatcactagcaatgatacctgcttctgcagtttctggcctctacttt
tccagtcccaaatccaaatattttgctgttggcaagatatgtaaagatcaggttgaagat
tatgcacggagaaaaaatttgtctgtcgcagaggtagagaaatggctgggacccattttg
ggatatgatactgaataa
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integrated database retrieval system
