Caloenas nicobarica (Nicobar pigeon): 135987449
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Entry
135987449 CDS
T11056
Symbol
PSEN2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135987449 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnic01002
]
135987449 (PSEN2)
Peptidases and inhibitors [BR:
cnic01002
]
Aspartic peptidases
Family A22: presenilin family
135987449 (PSEN2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Motif
Other DBs
NCBI-GeneID:
135987449
NCBI-ProteinID:
XP_065488438
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Position
3:103815164..103832048
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AA seq
458 aa
AA seq
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MITFMNNSDSEEEPCNERTSLMSAESPPVPSYQDGLQASQAGEAQAHRKRRTGSSRSPNN
IADGEMSDSGVPVREGALENEEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTE
KNGQLIYTPFTEDTPSVGQRLLNSVLNTIIMISVIVVMTVFLVLLYKYRCYKFIHGWLIL
SSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFLIIWNFGAVGMICIHWKGPLQLQQAYLIM
ISALMALVFIKYLPEWSAWVILGAISIYDLMAVLCPKGPLRMLVETAQERNEPIFPALIY
SSAMIWTVGMAKPDTAARRSSQQAWDAAEDGRENHRSPSHADSQMSEARSPVPSRPITSF
EELEEEERGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVFK
KALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgttcatgaacaactcagacagcgaggaggagccctgcaatgagagaacatcc
ctgatgtctgcagagagccctccagtcccctcctatcaggatggcctgcaagcctcgcag
gcaggggaagcgcaggcacacaggaagaggcgaacaggtagcagccgtagccctaacaat
atcgctgatggagaaatgtctgactcaggtgttccagtgagagaaggcgccttggaaaat
gaagaggaggaactgaccctgaaatatggagcaaagcatgtaatcatgctctttgtgcct
gtcaccctttgtatgattgttgtcgtcgccaccataaagtcagtgcgcttctatacggag
aaaaacgggcagctgatctacacccctttcactgaggataccccgtctgtgggccagcgt
ctcttgaactctgtgttgaacaccatcataatgatcagtgtcatcgttgtaatgacagtg
ttcctagtcctgctctataaataccgctgctacaagttcatccatggctggctgatcctg
tcctctttgatgctgctcttcctctttacctacatatatctcggtgaagtattgaagaca
tataacgtggccatggattaccccactctgttcttaatcatctggaactttggagctgtt
ggaatgatttgcatccactggaaaggtcccttgcagctccagcaagcatatctcattatg
atcagtgctctgatggcactggttttcattaaatatctacctgaatggtcagcatgggtg
attctaggtgcaatctccatctatgatctgatggctgttctctgtcccaaggggccactg
agaatgctggtagaaactgcacaggagagaaatgagcccatttttcctgcattaatatat
tcctctgctatgatatggacagttggaatggcaaagccagacacagcagcaagaagatca
agtcaacaggcgtgggatgcagctgaagacgggagagagaaccacaggagcccttcacac
gcagactctcagatgtcggaggcgagaagtcctgttccaagccgccccatcacttctttc
gaggagcttgaggaggaggaaaggggtgtgaagctgggccttggagacttcatcttttac
agtgtgcttgttgggaaagcagctgctacagctagtggagactggaatactacgctggcc
tgctttgtagccattctcataggtttatgcttaactcttttgttactggctgtttttaag
aaagcactacctgctcttcccatctccatcacctttggcttgatcttctacttctcaaca
gacaaccttgtgcgaccattcatggacaccctggcctcccaccagctgtatatttag
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