Caloenas nicobarica (Nicobar pigeon): 135988515
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Entry
135988515 CDS
T11056
Symbol
LEMD3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135988515 (LEMD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135988515 (LEMD3)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
135988515 (LEMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
135988515
NCBI-ProteinID:
XP_065490616
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Position
1:37212217..37262395
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AA seq
912 aa
AA seq
DB search
MATAAQLTDEELFSELRRFGFSPGPVTESTRPVYLKKLKKLREDERAGARGGANKTRNSN
NNNTGAGAAPGGGGPGRAAPGVGARLVGAERPYLPGAAAGSSRSRAAPPAGGGKVLLGFS
SDESDVETSPRSQAGASGRRERASPLFRGPRPAAPHGACGVSNSSPPEEAARRKPNAWWG
AAGRRPAGALGVREPGDGEEDGGEEDDEEEEEAESEQQRWKNRTVNGNRLLSYGGSRDKY
SDSEEEEEARAKQQVPKEESAVRRPRRSLSKSPAPFITSKCAAAGAGVMETGQERAGGGC
GAGVIVTNDRAAAAEAAAAGSLDRGRNQEEAAAGGGGGGCENLDSSPPSPRYRIGLPKKS
STVLLLPPPLADVDSSKITDPPGTIRKATNNHVLSGAAGSYNVESRIYSATNSLPPGGTT
SSLRLNHSNHTGSNHTYLKNTYKKNLSEPEEELLQQFKREEVSTTGGFSAHYLSMFLLTA
ACLFFLILGFTYLRMRGSGVAEDVGANIKNPFSEELPKIKEDEINLMMNSLYALHDKLAQ
VAGEHECGSSIQRNLTVQEAAAYLKNLDPEYESVLNTALQWILSSGEDVGIKCLSSDPDE
MDVTNVTDVKYLESTSPKMSFRCRFRRAFVNVTHRLSILLLGVAMVWGVLHYMKYRWAKE
EEETRQMYDMVVKIIDVLRSHSEACSENKDLQPYMPILHVRDSLIPPQDRKKMKKVWNRA
VDFLAANESRVRTETRRIGGAEFLVWKWMQPSAASDKTLVIPSKVWQGQAFHLDRRNSPP
NSLTPCLKIRNMFDPVMEIGDHWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCL
SPEYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSHLR
LRTGTTNSQGSS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggccgcgcagctcacggacgaggagctcttctcggagctgaggcgcttcggc
ttctccccggggccggtcaccgagagcacccggcccgtctacctgaagaagctgaagaag
ctgcgcgaggacgagcgggccggggcccgcggcggcgccaacaagacccggaacagcaac
aacaataacacgggggccggagcggcgccgggcggcggcggccccgggcgagcggccccg
ggcgtgggcgcgcggctggtgggcgccgagcgcccctacctccccggggctgccgccggg
agcagccggagccgcgcagcaccccctgccgggggcggcaaagtgctgctgggcttcagc
tcggacgagtcggatgtggaaaccagtccccggagccaggccggcgccagcggcaggaga
gagcgggcttcacccctcttccgcggcccgaggcccgccgccccccacggcgcctgcggc
gtgagtaacagctcccccccggaggaggcggcccggcggaagcccaacgcctggtggggg
gcggcgggcaggagaccggcgggggctctgggtgtgcgggagcccggggacggcgaggag
gacgggggagaggaggacgacgaagaggaggaggaggcggagagcgagcagcagcggtgg
aagaaccggaccgtgaacggtaaccggctcctctcctacggcggcagcagggacaagtac
tctgactcggaggaggaggaggaggcgagggccaagcagcaggtaccgaaggaggagtct
gcagttcgccggcccagacggagcctcagcaagtctcctgctccattcataacaagcaaa
tgcgctgcagccggtgctggcgtgatggagacgggccaagaaagggctggcggaggctgt
ggtgctggtgtaatcgtaacgaatgacagggcggcggcggcggaggcggctgctgccggg
agtctagacaggggcagaaatcaggaggaggcggcggcggggggaggaggaggaggatgt
gaaaatctggactctagtcctcccagccccagataccgcattggcctaccaaaaaaatcc
tcaacagtattgttgctgccaccaccgctcgcggacgtggacagcagtaaaatcactgac
cctccaggcaccattaggaaagcgaccaataatcatgttctcagcggtgctgctggtagc
tacaatgttgaatccaggatctattcagctactaacagccttcccccgggtggaaccacc
tcctcccttagactcaaccactccaatcatacgggttcaaatcatacctacctgaaaaac
acctacaagaagaatctctcggagcccgaggaggagcttctccaacagttcaaaagagag
gaggtatccaccactggaggcttcagtgcacattacctgtccatgttcctcttaactgct
gcatgcttgttctttctgatactgggattcacatacctgagaatgagaggttctggagta
gctgaggatgtgggagccaacatcaagaatcccttcagtgaagaactaccaaaaataaaa
gaagatgaaataaatctcatgatgaacagcctatatgcacttcatgataaattggcacaa
gtagcaggggaacatgaatgtggcagctctattcaaagaaatcttaccgtccaggaggca
gctgcatatttaaaaaatttagatccagaatatgaaagtgtacttaacacagcattacaa
tggatcttgagtagtggagaagatgttggcataaagtgtctcagcagtgaccctgatgag
atggatgtcactaatgtgacagatgtgaagtatctggaatccactagtccaaagatgtct
ttcaggtgtcgttttcgacgtgcgtttgttaatgtaactcacagattatcaatattgctt
ttgggtgtagcaatggtttggggagtcttgcactacatgaaataccgttgggcaaaagag
gaagaagaaacgaggcaaatgtatgatatggtggtaaaaatcatagatgttctaagaagt
cacagtgaggcgtgttctgaaaacaaagacttgcagccttacatgcctattttacacgtg
cgtgattctctaataccacctcaggacaggaagaaaatgaagaaagtctggaatagagca
gttgattttctggcagcaaatgaatctagagttcgcacagagacacgaagaataggcggt
gctgagttcttggtttggaaatggatgcaaccttctgcagcatctgataaaactttagta
ataccatccaaagtgtggcaaggccaagcatttcatctagatagaagaaattcaccaccg
aacagcttgacaccatgtctaaagattcgcaatatgtttgatccagttatggaaataggt
gatcactggcacctagcaattcaagaagcaatcttggagaaatgtagtgataatgatgga
attgttcatattgctgttgacaaaaattcacgtgagggttgtgtatatgtgaagtgtctc
tctccagagtatgctggaaaggctttcaaggcattacatggctcctggtttgatggaaag
ctggtaacagtaaaatacctgcggctagatcgatatcatcatcgttttccacaggctctt
acttgtaacactccactgaagccatcaaacaaacacatgaactctatgtcacatctgcgt
cttcggacaggcacaactaattctcagggaagttcctga
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