Caloenas nicobarica (Nicobar pigeon): 135988748
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Entry
135988748 CDS
T11056
Symbol
EGF
Name
(RefSeq) pro-epidermal growth factor isoform X1
KO
K04357
epidermal growth factor
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04010
MAPK signaling pathway
cnic04012
ErbB signaling pathway
cnic04020
Calcium signaling pathway
cnic04068
FoxO signaling pathway
cnic04510
Focal adhesion
cnic04540
Gap junction
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135988748 (EGF)
04012 ErbB signaling pathway
135988748 (EGF)
04068 FoxO signaling pathway
135988748 (EGF)
04020 Calcium signaling pathway
135988748 (EGF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135988748 (EGF)
04540 Gap junction
135988748 (EGF)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135988748 (EGF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cnic04052
]
135988748 (EGF)
Cytokines and neuropeptides [BR:
cnic04052
]
Cytokines
Growth factors (RTK binding)
135988748 (EGF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
Ldl_recept_b
cEGF
EGF_CA
EGF
EGF_3
DUF5050
SGL
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
135988748
NCBI-ProteinID:
XP_065490986
LinkDB
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Position
4:8315570..8377790
Genome browser
AA seq
1309 aa
AA seq
DB search
MFLFVVAFLPVVFKIGFVSLSTLQHRNCPNGYRLKTENSACIDIDECFEGGLGTCGQTCI
NVPGSYICSCLPGYTLDIDKRSCYVNDPAPFLLFNHGNAIFRIDTEGTNHERLVADTGHS
TLMDFHYTEEKVYWVDSERRLLQRINLNGSKRERLSYTDKGISGFAIDWINQDILWANRQ
KATIEATDMNGKKRRVILRDVGQPTKITIDAEQRLVFWSSEGTVSNIHRVSLIGSIVRTL
LRTTEKIKAISLDLVDTRLYWIQHDHRKEISHIGSCNYDGGAVRLLKNSVRHQLLGISLF
AEHLYYSELKSGMIWRANKYTGKVAVTISLKPSFFPPVEIKVVHPFKQPGARTEPQHFEK
ETCDLNKEKCRRRICRPDSRSHRCKCSNGFILSRNKQFCEDINECGFWNHGCTLGCVNIP
GSYYCTCPRGFVLLPDRKTCHELISCTSNDTECSHGCLQTSKGPVCFCPEGSVLKEDGKA
CTGCTSPDNGGCSQICSSLSPSSWECACFPGYKLQRDRKRCTAIGPKPFLLFANSQDIRQ
ISFDGADYVSLLDWQMGIVLALDFDPVKNKIYFAHTALKWIERADLDGSNREKVIHEAID
IPEGLAVDWINRKLYWTDRGKACIERSNLSGMQRKMIIWKDISQPRGIAIHPFAKRLFWT
DMGVNPRIESSSLEGIDRQVIASTGLVWPSGIALDYLADKVYWCDAKQSVVESANLDGSG
RRILAQNDVGVHEKRGRNEDSWLNNMTAMGEDFTVTLLISCCSSLHSGKACVHLLRQMPS
HLFEGHPFDVAVFEDHLWFSDWARPSVMRVDKKTGQNRVRLRGSMLRPSSMVVVHPLAKP
GANPCLYDNGGCDQICENNFGVAHCICHPGFGKTQDGKTCHALNVSNTTTGSVSVYKEVV
PMPTPETLLRSTQSSGIFKDTDSAEKQKMSISLMAEIMVSDEDDCTALECDVNAQCVLLE
DGAMCQCLKGFTRKGKSCYDVDECAINIDHCNRNVSSCINTEGGYVCKCLEGYMGDGVHC
YDIDECKMGSHTCGENRTCTNTEGNFTCSCADDASGTGIGCKATVSPTIVSNEYSTHPVQ
GDSAGCPPSYESYCLHGGVCNYVSDLQDYACNCVTGYVGERCQFSDLEWWEQQQAERVKM
RNVTIAVCVAALVLLLLLGFLAACCHRSQNLYKKNLYAEAIRDASSRADNENVTPTSNKS
RFAVVKECNTSLETKAVDLIGCETTDPHPACPSEYVEEQPIIYDKAVETLAEDEQEQSYR
REVPVGENLCQPMGAAKVPPQPPWSIHPKSPLEREPCELGPASLLMQPD
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcttcgttgttgcttttttgccagtggtttttaaaattggttttgtcagcctc
tcaactctgcagcaccggaactgtcctaatggatacagattaaagactgaaaattctgct
tgtatagatattgatgaatgctttgaaggtggtttgggaacctgtggccaaacctgcatc
aatgttccagggtcctacatctgctcctgtttgcccggctacactttggatattgacaaa
cgatcttgctatgtgaacgaccctgcaccattcctgctttttaaccatggaaatgccatc
tttagaattgacactgaagggaccaatcatgaaagactggtggctgataccggtcactca
acacttatggactttcattatacagaagagaaagtgtattgggtagactctgaaaggcga
ctacttcaaagaatcaacctgaatggctcaaaacgagagagactaagttacacagacaaa
ggcatttcaggatttgctattgactggataaatcaagacattctctgggccaacagacag
aaagcgacaatagaagcgacagacatgaatgggaagaaacgccgagttattctaagagat
gttggtcaacccacgaagattaccattgatgctgagcaaaggctagtattttggtcttca
gaaggtacagtttccaacatacaccgagtgtccctcattggaagtattgtgaggactctt
ttaagaaccacagaaaaaataaaggctatttcactagatttggttgacacaaggctctac
tggatccaacacgaccacaggaaagagatttcccacattggatcatgcaactatgatggt
ggagctgttcgtttgctcaaaaattctgtccgacatcaattgcttggtatatctctcttt
gctgagcacctgtactattcagagttgaaatctggtatgatatggagagccaacaagtac
actggaaaagttgcagtcacaattagtctgaagccatcattttttccaccagtggagata
aaagtcgtgcatccctttaaacagccgggtgcaagaacagaaccacagcattttgaaaaa
gaaacctgtgatttgaacaaagaaaagtgcagaagaagaatctgcaggccagactcaagg
agtcatcggtgtaaatgttctaatggctttattttaagtcgaaataaacagttttgtgaa
gatatcaatgaatgtggcttctggaatcacggctgtactttgggctgtgtgaacattcct
ggttcctattactgcacctgcccgagaggttttgttctgctgcctgataggaaaacatgt
catgagctaatttcctgtacaagtaatgacactgaatgtagccatggttgccttcagaca
tctaaagggcctgtttgcttttgtcctgaaggatctgtactgaaagaggatggcaaagct
tgcacgggttgtacatctccagataatggtggttgtagtcagatatgctcttctttaagc
ccatcgtcctgggagtgtgcttgttttcctggatacaagcttcagcgagacagaaagcgc
tgcactgctataggtcctaagccatttttgttatttgcaaatagccaagatatccgccag
atcagttttgatggtgcagattacgtaagtttacttgactggcagatgggaatagtctta
gcactggactttgacccagtgaaaaataagatttactttgcccacaccgccttgaaatgg
atagaacgagctgatctggatggctcaaatcgtgaaaaagttattcatgaagctatagat
atacccgaaggccttgctgtggactggattaaccgtaaattgtattggacagacagaggg
aaggcatgcattgaaaggagcaatctgagtggaatgcaaagaaaaatgatcatctggaag
gatatctcccagccacgagggattgccattcacccatttgcaaagagattattctggact
gacatgggggtcaatccccggattgagagctcttcattagaaggcatcgatcgccaggtt
atagccagcacaggtcttgtgtggcccagtggaatagccctcgactacttagctgacaag
gtgtactggtgtgatgctaagcagtcggtggttgagagcgcaaacctggatggttctggt
cgtcgaattcttgcacagaatgatgtaggtgtgcacgaaaaacgtgggcggaatgaggac
tcttggctcaataacatgactgccatgggtgaagactttacggttactctgttaatcagc
tgctgttctagtctgcactctgggaaggcttgtgttcatctcctaaggcagatgccctcc
cacttatttgaaggtcacccttttgatgtagcagtgtttgaggatcacctttggttttct
gactgggctaggccatcagtaatgagggtggacaagaagaccggccaaaatagggtacgt
cttcgaggcagcatgctgagaccttcatcaatggttgtagttcatcctttggcgaaacca
ggggcaaatccttgcctttatgataatgggggctgtgatcagatctgtgaaaacaatttt
ggagttgcgcattgcatatgccatccaggatttgggaaaactcaagatggaaaaacctgt
catgctctgaatgtttccaacacaacaacaggaagcgtctctgtgtacaaggaggtagtg
ccaatgcccacaccagagaccttactccgtagcacacaaagcagtgggatattcaaggat
acggacagtgcagaaaagcaaaaaatgagcatttcattgatggctgaaataatggtatca
gatgaagatgactgcactgcactagaatgtgatgtcaatgcacagtgtgttttgctggaa
gatggtgctatgtgccagtgtttgaaaggatttaccaggaaggggaaatcatgctatgat
gttgatgagtgtgctataaatatagaccattgtaatcgaaatgtgtcaagctgtatcaat
acagaaggaggctacgtctgtaaatgcttggagggctacatgggagacggagtccattgc
tacgatattgatgagtgcaagatggggtcccatacctgtggagagaacagaacctgcaca
aatacagaaggaaacttcacttgctcatgtgctgatgatgcttctggaactggcattggc
tgcaaagctactgtgtcccctaccattgtcagcaacgaatactctacacaccctgtgcaa
ggcgactctgcagggtgccctccttcctacgagtcgtattgtctccatggcggagtgtgc
aattatgtttctgatctacaagactatgcctgcaactgtgtgacgggctacgttggggag
cggtgccagttcagcgacctggagtggtgggagcagcagcaggcggagcgggtgaagatg
cggaacgtcaccattgccgtgtgcgtagctgcgctggtcctcctgctcctgctggggttc
ctggccgcctgctgccacagaagtcagaacttgtataagaagaatctctatgcagaagcg
ataagagatgctagcagccgtgctgacaatgagaacgtgacacctaccagcaacaaatct
cggtttgcagttgttaaggagtgtaacacttccctggagactaaagcagttgatctaatt
gggtgtgagacaacagatcctcatcctgcctgtccttcagaatatgtggaagaacagccg
ataatatacgacaaagcagtggagactttggcagaagatgagcaagaacaaagctatcga
cgagaggttcctgttggagagaacttgtgtcagcccatgggggcagcaaaggtccctccc
cagcctccctggagcatccaccccaagtccccgctggaaagggagccctgcgagcttggc
ccagccagcctgctcatgcagccagactag
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