Caloenas nicobarica (Nicobar pigeon): 135989950
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Entry
135989950 CDS
T11056
Symbol
NR1H3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03320
PPAR signaling pathway
cnic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135989950 (NR1H3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
135989950 (NR1H3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135989950 (NR1H3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cnic03310
]
135989950 (NR1H3)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135989950 (NR1H3)
Nuclear receptors [BR:
cnic03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
135989950 (NR1H3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
135989950
NCBI-ProteinID:
XP_065493174
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Position
5:42353625..42383960
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AA seq
409 aa
AA seq
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MGPTQLSTQDHGKRVASVFEMEEEGLSLFPGSENPPEPAENPPLKRKKGPAPKMLGNEVC
SVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAQYVCKNGGKCEMDMYMRRKCQECRLRKC
QEAGMREQYVLSEEQIRLKKLKKQEDDQARTVVVRPNPLNPPSPSHELTPEQLSMIEKLV
AAQQQCNQRSFTDRLKVTPWPQVPDPNNREARQQRFAHFTELAIISVQEIVDFAKQLPGF
LELTREDQIALLKTSTIEVMLLETSRRYNPEIESITFLKDLSYNRDDFAKAGLQFEFINP
IFEFSKGMNELQLNDAEYALLIAINIFSADRPNVQDQSLVERLQHTYVEALHSYICINRP
NDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccactcaactcagcacacaggatcatgggaagagggtggcaagtgtatttgag
atggaggaggaagggctttcgctcttccctggctcagagaacccccctgagcctgcagaa
aatcctcctctgaagcggaagaagggcccagcccctaagatgctgggaaatgaagtgtgc
agcgtgtgtggggacaaggcctcgggcttccactacaacgtgctgagctgtgaaggctgc
aagggcttcttccgccgcagtgtcatcaagggcgcacagtacgtctgcaagaacggtggc
aagtgtgagatggacatgtacatgcgtcgcaagtgtcaggagtgccggctgcgcaagtgc
caggaggcgggcatgcgggagcagtatgttttgtctgaagaacagatccgactgaaaaaa
ctgaagaagcaggaagatgatcaggctcggacagtcgtggtgcgtccaaaccctctaaat
ccaccaagcccttcccacgaactgacgcctgaacagttgagcatgatagaaaagcttgtg
gccgctcagcagcagtgcaaccagcgctcattcacagacaggctcaaagtgacgccatgg
ccccaagttcctgaccctaataaccgtgaagcaaggcagcagcgtttcgctcactttaca
gaacttgcaattatctctgtgcaagagattgtggactttgccaagcaactacctggcttc
ctggagctcaccagggaagaccagatcgctttattgaagacatctaccatagaggtgatg
ttgttggagacatctcggcgctacaatccagagattgagagcatcacctttcttaaggac
ctgagctataatcgggatgacttcgccaaagcaggtctgcagtttgagttcattaacccc
atctttgagttctcaaagggaatgaatgagctacagctcaatgatgctgaatatgcactt
ttaatcgccatcaacattttctctgcagaccgaccgaatgtgcaggaccagtccctggtg
gaaaggctgcagcacacctatgtggaagctcttcattcttacatttgcatcaacagacca
aatgaccgcctgatgtttccacggatgttaatgaagctggtcagtcttcggacactaagt
agtgtccactctgaacaggtgtttgcccttcggctgcaggacaagaaactccctcccctg
ctctcagaaatctgggatgtgcatgagtga
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