Caloenas nicobarica (Nicobar pigeon): 135990267
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Entry
135990267 CDS
T11056
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135990267 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135990267 (GLI2)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
135990267 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
135990267
NCBI-ProteinID:
XP_065493887
LinkDB
All DBs
Position
6:29385346..29580753
Genome browser
AA seq
1528 aa
AA seq
DB search
METSASTAAGKKEGKGAVLEGNGFTETGKKPTPLAAAGATVAQGVPQHIFPAFHAPLPID
MRHQEGRYHYEPHSIHAIHGPPSLSGSPVISDISLIRLSPHPAGPSESPFSPPHPYVAPH
MEHYLRSVHGSPTLSVISAARGLSPADVAHEHLKERGLFGLPPPPPGANPADYYHQMTLM
AGHPNPYGDLLMQSGGAASTAHLHDYLSPVDVSRFSSPRVTPRLSRKRALSISPLSDASI
DLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGTISPAFSFPHPINPVTYQQILTQQ
RGLSSAFGHTPPLIQPSPTFPTRQHMAVISVNPSQAQISSNSNCISDSSQSKQNSESAVS
STVNPVINKRSKVKTEVEGLPPASPTTQEHLTDLKEDLDKDECKQEPEVIYETNCHWEGC
TKEYDTQEQLVHHINNDHIHGEKKEFVCRWQDCTREQKPFKAQYMLVVHMRRHTGEKPHK
CTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPY
VCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHPRPPPLKENGDNEASAKQSS
KVSEESPEANSTTRSMEDCLQVKTIKTENSVMCQSSPGGQSSCSSEPSPLGSTNNNDSGV
EMNMHSGGSLGDLTALDDNAPVVDSTVSSGNSTVSLQLRKHMTTMQRLEQLKKEKLKTVK
DSCSWVNPAPQARSTKLPPISGKGSILENSGGSSATLPNPRIMELSVNEVTMLNQLNERR
DSTTSTISSAYTVSRRSSGISPYFSSRRSSEASQLGHRPNNMSSADSYDPISTDASRRSS
EVSQCSGMPGLLNLTPAQHYRLKAKYAAATGGPPPTPLPNMERMTLKNRISLMDGPDPTL
PSIRLPPGPRRCSDGNTYGYPSAAAFPHEVPGNCTRRASDPVRRPAGDPQALPRVHRFNS
TNSMNPFHPLHPTDRRNFGPQGYGRSDGSLPRHTYSPRPLSISENIAMEAMAGDTEAPIG
DDDIMLPDDVVQYIKSQSNGTAAESTSMGYSNEMQSFQGSGKLQPPTLPGQRRMAVAEAN
MSHLGPMMAECPMSFDTSSDMNKNNMPVQWNEVSSGTVDIMSNQSKQQFSQENLAVVQQK
QNFGQYQNYNQQQMQLPENNMNITPQSFAQRNVGMDGQRLNCMQLRQQPMSLGPGMNSDL
GLHAGYNQPHQMLSPGAISGNPNQISPSCSSMAAKSGPHLHPQQIDMATDPSLMVNSNSE
RTMLGQVMHEPNQQNYSSQPTHLNYPMAQEAFHQPIMTSNQPSFEHQQSMMASATQAYPP
GMVQPRPPPEPSPANRSRGLRTVQQLGYMRTPHPTNTISPGQETVEAMHKRTSDMLPAPT
QQCADGTRENNLMYYYGQIHMYEQNSSFDNHGDCQVRQQQCALNSKPAALPSPGVNQVSS
TVDSQGLEPPQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSSRLTTPRNSLTLPTIPA
GISNMAIGDMSSMLTTLAEESKFLNMMS
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctgcttcaactgctgctgggaaaaaagaagggaaaggtgcagttctggag
gggaatggctttacagagacggggaagaaacccactcctttagcagctgcaggagcaaca
gtggcacaaggagtgccgcagcacatttttccggccttccacgctcctttgccaattgac
atgcgccaccaggaaggacgataccattacgaacctcactctatccacgctatccacggg
cctccttccctgagcggcagccctgtcatctctgacatctccctcatccgcctgtctccg
caccccgccgggcccagcgagtcgcccttcagccctccgcacccctacgtggcaccccac
atggagcactacctccgctctgtccacggcagccccacgctctccgtcatctctgctgcc
aggggcctcagccccgctgacgtggctcatgagcacctgaaggagcgaggtctctttggg
ctgcccccaccgccaccaggagccaaccctgctgactactaccaccaaatgacactgatg
gctggccacccaaacccttacggggacctcctgatgcaaagcggaggagcggccagcaca
gcccacctccacgattacctcagccccgtcgatgtgtcccggttctcaagcccacgggtg
actccaagattaagccgaaaacgagccctgtctatctccccgctgtcagatgccagcatt
gatctccagacgatgatcaggacctccccaaactctcttgtggcatatatcaacaactcc
agaagcagttcagcagcaagcggctcctacgggcatttatctgcggggacaatcagccca
gcattcagcttcccccaccccatcaaccctgtgacataccagcagatcctgacccaacag
agaggcttgagctcagcctttggacacactcctcccctgatccagccatctccgaccttc
cccacacgtcagcacatggcggtcatctctgtcaacccatcacaagcacagatcagcagc
aacagcaactgtatctccgactccagccagagcaagcagaacagcgagtcggccgtcagc
agcacagtcaatccagtcattaacaagcgcagcaaagtcaagactgaagttgagggcttg
cccccagcctccccaaccacacaggagcatctgacagacctgaaggaagatctagataag
gatgaatgtaaacaggagcctgaggttatttatgagacgaactgtcactgggaagggtgc
acaaaggaatatgacactcaagagcagctcgtccatcacatcaacaacgatcacatccat
ggggagaagaaagagtttgtctgccgctggcaggactgcacacgggagcagaagccgttc
aaggctcagtacatgctggtggtgcacatgcgaaggcacactggagagaagccacacaag
tgcacgtttgagggttgctccaaagcctattcccgcctggagaacttaaagacacacttg
aggtcccacactggagaaaaaccctatgtctgtgaacatgaaggctgcaataaagcattt
tccaatgcctcggacagagccaagcaccagaacaggacgcattccaatgagaaaccctac
gtctgtaaaatccctggctgcacgaagcggtacacagaccccagttccctcaggaaacac
gtcaagaccgtgcacgggcctgatgcccacgtcacaaagaagcagcgcaacgatgttcac
cccaggccacctccgctcaaggaaaatggggacaacgaggcaagcgccaagcagagcagc
aaggtttcagaggagagccctgaggccaacagcaccacaaggagcatggaagattgctta
caagtcaaaacaataaaaacggagaattctgtgatgtgtcagtccagtcctggtggccag
tcatcatgcagcagtgagccgtcaccccttggcagcaccaacaacaatgacagtggagta
gaaatgaacatgcacagcgggggaagtctgggagatctgacagcgttggatgacaacgct
cctgttgtggactcaacggtctcatctggtaattcaacagtcagcctgcagctaaggaaa
cacatgacgacaatgcaacgacttgaacagctcaagaaagagaaactcaagacagttaag
gactcctgctcatgggtgaacccagctccacaagccagaagcaccaagctgcctcccatc
tcaggaaaaggctccattctagaaaatagtggtggttcttctgctacgctgcctaatccc
agaataatggagctgtctgtcaatgaggttaccatgctgaaccaactcaacgagcgccgt
gatagtacaacaagcaccatcagctccgcctacaccgtcagccgcagatcatcagggatc
tccccgtacttctccagccgccgttccagcgaggcttcgcagcttgggcaccgtcccaat
aacatgagctctgccgactcctatgaccctatttcaacagacgcctcccgtcggtcaagc
gaggtgagccagtgcagcgggatgccaggtctgctgaacctcacaccagctcagcactac
aggctgaaagccaagtacgctgctgccacagggggcccgcctccgactcccctgcccaac
atggagaggatgaccctgaagaacaggatctcactaatggatggaccagaccctaccttg
ccctccatccgtctcccaccaggccccaggagatgcagcgatgggaacacctatggctac
ccgtcagctgcagcgtttccccatgaggtgccaggcaactgcacaaggcgggcgagtgac
cctgtgaggagacctgccggagacccccaggccctcccacgagttcaccgcttcaacagc
accaacagcatgaaccccttccatcctctgcaccccacagacaggaggaatttcggccct
cagggctatgggcgctcagatgggagcctcccccggcacacctactcaccccggccactg
agcatcagcgaaaacatcgccatggaagccatggctggggacacagaggcacccatcgga
gatgatgacattatgctgccagatgatgtagtgcagtacatcaaatcccagagcaacggg
acagcagccgagagcacttccatggggtacagcaacgagatgcagagcttccagggaagt
gggaagctgcagcctccaaccttacctggccagcgcaggatggcagtggctgaggcaaac
atgagccacttgggacccatgatggcagaatgtcccatgagctttgacacttcctcagat
atgaataaaaataacatgcctgtccagtggaatgaggtcagctcgggtacagttgatatc
atgtccaatcagtcgaagcagcagttttcacaagagaacttagcagtggtccagcagaag
cagaactttggtcagtaccagaactacaaccagcagcagatgcagctgccagagaacaat
atgaacataacaccgcagagctttgcacaaagaaacgtgggcatggatgggcagaggcta
aactgtatgcagctgcggcagcagccgatgagcctaggccctggtatgaactctgatctg
ggcttgcacgcaggatataaccaacctcatcaaatgctgagccctggtgcaatcagtggc
aacccaaatcagatctctccttcctgcagcagcatggcagcaaagtctggaccccacctt
caccctcagcaaatagacatggcgaccgacccttctttaatggtcaacagcaacagtgag
cgcacaatgctgggccaggtcatgcacgaaccgaatcagcagaactattcatctcagcca
acccacctgaattaccccatggctcaggaggcctttcatcagcccatcatgacctccaac
cagcccagctttgagcatcaacagagcatgatggcctcagccacacaggcatatccaccc
ggcatggtccagcctcgacctccacccgagccaagcccagccaacagatcccggggcctc
cgcaccgtccagcagctgggctacatgagaactccccaccccacaaacaccatcagccca
ggccaggagacggtggaggccatgcataaaagaaccagtgacatgttgccggccccaacc
cagcagtgtgcagatggcacaagggaaaataatttgatgtactattacggtcaaatccac
atgtacgaacagaacagcagctttgataatcacggggactgccaggtcagacagcagcag
tgcgcgctgaacagcaagccggctgctcttccctccccaggcgtgaaccaggtgtccagc
acagtggactcacaaggtcttgagcctccccagatagattttgatgccatcatggatgat
ggggaccattcgagcctgatgtcaggaaccttgagccccagcatcctgcagaacctctcc
cagaactcctctcgcctgacaactccacgaaactctctgacactgcccaccataccggcg
ggaataagcaatatggcaataggcgacatgagctccatgctaaccacgctggcggaagag
agtaaatttctaaacatgatgtcataa
DBGET
integrated database retrieval system
