Caloenas nicobarica (Nicobar pigeon): 135990396
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Entry
135990396 CDS
T11056
Symbol
CXCR4
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03250
Viral life cycle - HIV-1
cnic03260
Virion - Human immunodeficiency virus
cnic04020
Calcium signaling pathway
cnic04060
Cytokine-cytokine receptor interaction
cnic04144
Endocytosis
cnic04672
Intestinal immune network for IgA production
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135990396 (CXCR4)
03260 Virion - Human immunodeficiency virus
135990396 (CXCR4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
135990396 (CXCR4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135990396 (CXCR4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135990396 (CXCR4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135990396 (CXCR4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
135990396 (CXCR4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cnic04030
]
135990396 (CXCR4)
04050 Cytokine receptors [BR:
cnic04050
]
135990396 (CXCR4)
04090 CD molecules [BR:
cnic04090
]
135990396 (CXCR4)
G protein-coupled receptors [BR:
cnic04030
]
Rhodopsin family
Chemokine
CXC Chemokine
135990396 (CXCR4)
Cytokine receptors [BR:
cnic04050
]
Chemokine receptors
CXC Chemokine
135990396 (CXCR4)
CD molecules [BR:
cnic04090
]
Proteins
135990396 (CXCR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CXCR4_N
7TM_GPCR_Srsx
T4SS_pilin
Motif
Other DBs
NCBI-GeneID:
135990396
NCBI-ProteinID:
XP_065494123
LinkDB
All DBs
Position
6:complement(35543652..35546984)
Genome browser
AA seq
366 aa
AA seq
DB search
MAQSMDNSLDGLDLSSGFTIEFSDNGTDEVGSGDYGDYGEPCFQHENADFNRIFLPTIYS
IIFLTGIIGNGLVIVVMGYQKKQRSMTDKYRLHLSVADLLFVITLPFWSVDAAISWYFGN
VLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWLPAVL
LTVPDIIFASTSEVEGKYLCDRMYPHENWLISFRFQHILVGLVLPGLIILTCYCIIISKL
SHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDTFILLGVIRHRCSLETIVHKWISI
TEALAFFHCCLNPILYAFLGAKFKTSAQNALTSVSRGSSLKILSKSKRGGHSSVSTESES
SSFHSS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagcatggacaacagccttgacggcctggatctgtcctctgggttcaccatt
gaattttctgataatggcacagatgaggttggttcaggtgactatggagactacggagag
ccatgctttcagcatgagaatgctgatttcaaccggatcttcttgccaacaatctactcc
atcatcttcctgacgggaataatcggcaatggattggttattgttgttatgggctaccag
aagaaacaaaggagcatgactgataaatacaggctgcacctctctgtggctgacctcctt
ttcgtcatcaccttgccattctggtctgtggatgcggccataagctggtacttcgggaat
gttctgtgtaaggcagttcatgtcatttacacagtcaacctctatagcagtgtcttgatt
ttggcctttataagtttagatcgctacctggcaatagtccatgctaccaacagccagcga
ccacgaaagctgttggctgagaaggtggtgtatgtgggcgtgtggctaccagctgtgctt
ctgacagtgcctgacataatttttgccagtactagtgaagtagaaggaaagtatctatgt
gatcgcatgtatcctcatgaaaactggctgatttctttcagatttcagcatatcttggta
ggacttgtcttgcctggtctaataatcctgacttgctactgtattataatatctaagctg
tcacattcaaaaggccaccagaagcgcaaagccttgaagacaacggttatcctcatcctc
gccttctttgcctgctggctgccatattatatcggcatcagcatcgacacattcatcttg
ctaggagtcatcagacatcgttgcagcttggagacgatcgtgcataaatggatctccatc
accgaagccctggcattcttccactgttgcctgaatccaattctgtatgccttcctgggt
gccaaattcaaaacatcagcacaaaatgctttgacatcagttagcagagggtcaagcctc
aagattctttcaaaaagcaaacgtgggggacattcttctgtttctacagagtccgagtct
tcaagtttccattccagctaa
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integrated database retrieval system
