Caloenas nicobarica (Nicobar pigeon): 135990785
Help
Entry
135990785 CDS
T11056
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1 isoform X1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
135990785 (LGI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
135990785
NCBI-ProteinID:
XP_065494898
LinkDB
All DBs
Position
7:17786694..17798962
Genome browser
AA seq
543 aa
AA seq
DB search
MGNASRPFRRIAYFLCLLSVLLLTEGKKPVKPKCPAWCTCTKDNALCENARSIPRSVPPD
VISLSFVRSAFTKIPEGSFLLTPSLQLLLFTSNTFDVISDDAFMGLPHLEYLFIENNSIK
SISRNTFRGLKSLIHLSLANNNLQSLPKDIFKGLDSLTNVDLRGNAFNCDCKLKWLVEWL
GSTNATVEDIYCEGPPEYKKRKINSLSPKEFDCIITEFEVYQSLPYQSLSVDTFSYMNDK
HVVIAQPFTGKCIFLEWDHVEVMFRNYDNITGTSTVVCKPIVIESQLYVIVAQLFGGSHI
YKRDIFANKFIKIQDIEILKIRKPNDIETFRIAEDWYFVVADSSKAGFTTVYKWNGNGFY
SHQSLHAWYRDTDVEFLEISGKPHLILSSSSQRPVIYQWNKGTNEFVKRFDIQDMEDAYA
VKHFKVKEDVYICLTRFIGDSKVMKWGGSAFLDLQRMPSRGSMVFQPLQIDNYQYAILGS
DYSFTQVYYWDAEKAKFVKFQELNVQAPRSFIHVSINKRDFLFASSFKGTTLIYRHVIVD
LSA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgccagcagaccctttagaagaattgcttatttcttatgccttttatctgtg
cttttgctgactgaagggaagaaaccagtgaagccaaaatgtcctgcctggtgtacttgt
accaaagataatgctttatgtgaaaatgccagatctattcctcgcagcgttccgcctgat
gttatctcactatcctttgtgagatctgcttttactaaaatcccagaagggagttttttg
ctcacaccatctctgcagcttctgttgtttacatctaacacttttgatgttattagtgat
gatgctttcatgggccttcctcatctagaatatttgttcatagagaacaacagcattaag
tcaatttcaagaaataccttcagaggactgaaatctttaattcacctgagtctcgcaaat
aataatctccagtcgcttccaaaagacatattcaaaggcttggattctttaacaaatgta
gatcttaggggcaatgcatttaattgtgactgcaaactgaagtggttagtggaatggctg
ggcagcaccaatgcaaccgttgaagacatttactgtgaaggcccaccagaatataagaag
cgcaaaatcaatagcctctctccaaaagaatttgattgcattattacagaatttgaagtt
tatcagtcccttccataccaatctctgtcagtagatactttctcatacatgaatgataaa
catgtggttattgctcagccttttactggaaaatgcatctttcttgaatgggaccatgta
gaagtgatgttcaggaattacgacaacattacaggtacttcaactgttgtgtgtaaacct
atagttattgagagtcagctgtatgtcattgttgcacagctatttggaggctcccacata
tataaaagagatatttttgctaataagtttataaaaattcaagatattgaaatccttaaa
atccgaaaacccaatgacattgaaactttcaggattgcggaagactggtattttgttgtt
gcagacagttcaaaggctggtttcaccactgtttacaaatggaacgggaatggattttat
tcccatcagtctctgcacgcctggtacagagatactgatgtggagtttcttgaaatatcc
ggcaaaccacatttaattctgtcaagtagttcccaaagacctgtaatatatcaatggaac
aaaggaacaaatgaatttgttaagcgttttgatatccaagatatggaagatgcatatgca
gtgaaacatttcaaagtgaaagaggatgtgtacatttgcttaacaagatttattggggac
tctaaagtaatgaaatggggtggttcagcatttctggatttacaaaggatgccatcccga
gggtcaatggtattccaaccgcttcagatagataattatcaatatgccattcttggaagt
gattattctttcactcaagtctattattgggatgctgaaaaggcaaaattcgtgaagttt
caagaattaaacgtacaggcaccgagatctttcatacatgtctccatcaataaacgagat
tttctctttgcttcaagttttaagggaactacattgatttatagacatgtcatagttgac
ttaagcgcatga
DBGET
integrated database retrieval system
