Caloenas nicobarica (Nicobar pigeon): 135990843
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Entry
135990843 CDS
T11056
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04060
Cytokine-cytokine receptor interaction
cnic04672
Intestinal immune network for IgA production
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135990843 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135990843 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
135990843 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cnic04052
]
135990843 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135990843 (CXCL12)
Cytokines and neuropeptides [BR:
cnic04052
]
Cytokines
Chemokines
135990843 (CXCL12)
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Heparan sulfate / Heparin
Chemokines
135990843 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
135990843
NCBI-ProteinID:
XP_065495017
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All DBs
Position
7:complement(19478423..19497255)
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AA seq
131 aa
AA seq
DB search
MDLRALALLAFALAIISLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPSHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgagccctggctctgctcgccttcgccctggcgattatctccctctcggag
gagaaacctgtcagcctgacttaccggtgcccatgtcgattctacgagagcaacgtggca
agagccaacattaagcacctcaaaatcctctccacacccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagttaaagtggatccag
gaatatctggagaaagctttaaacaaaccaagtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggaggaag
aatggaggttcaagatgtaagaggcaagcgttgtaa
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