Caloenas nicobarica (Nicobar pigeon): 135992890
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Entry
135992890 CDS
T11056
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135992890 (RNF123)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135992890 (RNF123)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135992890 (RNF123)
Multi subunit type E3
KPC complex
135992890 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
135992890
NCBI-ProteinID:
XP_065498379
LinkDB
All DBs
Position
11:4601579..4653905
Genome browser
AA seq
1310 aa
AA seq
DB search
MTSRGAGTTFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHRVFTNADGNQPATAYRKHLT
FQNLQEHLDRLLAEEDGCEDSRDQVAEGRLGPSAVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGVGMAYFPAISL
SFKESVAFNFGSRPLRYPLVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLV
EKDMSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLI
QQLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIVPDLGLQIHYLRLTIAVLKHEKSR
KYLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAE
ERLRRRAYERGCQRLKKRIEVVESLQVQILKLLLNNKDRGGGVEASRYIFLNKFRKFLQE
NASNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPAALSSEEAYVPPQLFYNGKV
DYFDLQRLGGLLSHLKKTLKDDLAANANVLIDPAELQAVTMDDLDEDEESATSAAQSQRP
SAALAIGGALARPGWLSSPTLGRANRFLSTAAVSLMNPRRPLGTLEKIKVRTLSVEQRTE
EDIEGSHGNEGLLLGRPPEEPDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVN
EYAMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQD
IYWLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETL
MRLAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAP
YEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMAD
LLRSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDL
SVSLLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRL
PGLESVDHYPILVAVTGILVRLLVDTDAQGAERATAVLLADPCFQLRSIQYLLGHAEPLA
LAAAPPATDKRHFSLHTYTEYISAEELAKVDKMLSHLSEESKQAAATTLPTSEEDLCPIC
YAHPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgagaggtgctgggactactttctccaggaagaactacaggttgagcaccgag
ccagagaagtccaaggtcacagggatcgtgaacagcaggctgctgaatgattatctgcac
cgcgtctttaccaatgctgatgggaaccagcctgccactgcttacagaaagcacctgacg
ttccagaacctgcaggaacaccttgaccggttgctagcagaagaggatggctgcgaagac
agtcgagatcaggtagcagagggccggcttggtccctctgctgtggtgttggaccacaca
agcggttttgagggactgctgctggtcgatgatgacttacttggggtgattggccacagt
aactttgggtccatcagggccacgacgtgcgtgtataaagggaaatggatttacgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggaaggagtaggagatacgccagattcatacgcgtatgatggaaacagggtgcgc
aagtggaacgtgactactaccaactatggcaaatcttgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaacggcatatctctggga
actgcttttgataacatcacacggggcgttggaatggcttacttccctgccatcagcctc
tccttcaaagagtccgtcgcttttaactttggaagccgtccactccgatatcctttagtg
gagggttaccgccctttgcaagatcctcctgtcgcagacctagtgaaggctcgcaagctg
ttaggctacctgaagaacgtgatccatatcggaatagatgtgacggaggggaagctggtg
gagaaggacatgtccatgtggcagctgcagggagagcccacagtgttgattacactagcc
cacatcttcaattatttctctcctctcatgtgcaaggtgtacctggtggaagatgtgctc
atgaccttcctgttgagcatccttgagcgaggaggggcagtggaggcccatccccttata
cagcagctgctggatctcatgtggcttcttatggaggagtatgaagtacatgagtgcctc
aagcagctactgatgtctctgctgcgggcttacaggttttcacccatcgtcccagacctg
ggattacaaattcactacctccggctcaccattgcagtcttgaagcatgagaaatccagg
aaatatctactcagcaatgttctctttgatgtgctccgttcggttgtgttcttctacatt
aagagcccgctgcgtgtggaggaggcgggtttgcaggagctcattcccaccacgtggtgg
ccaaaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggagagtgctgag
gagagactgaggcggcgagcgtatgaaagaggctgccagcggctcaaaaaacgcatcgaa
gtggttgaaagtctccaagttcagattctgaagctgctgctgaacaacaaggacagagga
ggaggggtggaagcctccagatacatcttcttaaacaaattccgcaagtttcttcaggag
aacgcgagcaacagagggaacttgactgtgttgtgcccgccagagtacatggtgtgcttc
ctacaccggctgatcgctgccctgcgcttcttctgggatggccacaaggcaaagacccct
gctgcactgagcagtgaagaggcatatgtccctcctcaactcttctataatggcaaggtg
gattatttcgaccttcagcgacttggaggtctcctgtctcatcttaagaaaactctgaaa
gatgacctggctgcaaatgccaatgtcctgattgaccctgcggagctgcaggcagtgact
atggacgatcttgatgaagatgaggaatcagcaacatcagcagcacaatctcagcgtccc
tctgccgccctggccatcggtggagctcttgccagacctggctggctcagctcccccacc
ctgggccgtgccaaccgcttcctcagcacggcggctgtcagcctgatgaacccgcggcgg
cctctcggcaccctggagaagatcaaagtgcgcacgctcagcgtggagcagcggacagag
gaagacattgaaggcagccatggaaacgagggtctcttactgggcagacccccagaggag
ccagaccagcccatcacagagaactccctcctggaagtcctggatgggatagtgatgatg
tacaacctcagtgtccaccagcagctcgggaagatggttggtgtgtcagatgatgtaaat
gaatatgctatggcactgaaagacacagaggaaaaaatcagccgctgcccaaagaggagg
agggatatccacgaggagctgctgaagagccaaaaagtcttctccgagaagctcaatcac
ctgagccgacgccttgcctggataaatgtcaccatttattcaaaggagaagatgcaggac
atatattggctgctgcgggtgtgcatccgcaccatcgagcacggcgacaggacgggctca
cttttcgctttcatgccggagttctacctcagtgtggctatgaacagctatagcgcactc
aagaactacttcagccctgtaaacagcatggaggaacttccaggctatgaagagaccctg
atgcgcctcgctgccatcctggccaagcactttgctgactcgaggatcgtgggcacggac
atccgggactccctgatgcaggccttggccagctacgtctgctacccacactcgctgcgt
gcggtggagaggatcccagaagagcagcggatctccatgatgaagaacctcctggctccc
tatgagcagcgaccctgggcacagaccaactggattctcgtcaggctgtggcggggctgt
ggctttgggtacagatacacacggctcccacacttgctgaaaaccaagcctgaggatgcc
agcctgcccagcctgcagaagccgtgtccctccaccttgctgcagcggcacatggcagac
ctgctccgcagcgaccgcgacctggcccccagcttcctcaacagcgtcctcaaccagctg
aactgggctttctccgagttcatcggtatgattcaggagatccagcaggcagcagagcgc
ttggagaggaactttgtggacagccgccagctgaaggtgtgtgccacctgctttgacctg
tcggtgagcttgctcagggtgctggagatgactgtcacgctggcgccggagatctttctc
gactggaatcgcccatcatcagagctgctgcttcggaggcttgcccagctcttgaaccag
gtgctgaaccgtgtgacagctgaaaggaacttatttgacagagtggtcaacctccgtctg
ccagggctggagagcgtggaccattacccaatccttgtggccgtgacggggatactggtc
cggctgcttgtggacactgatgctcagggggctgaacgtgcgacggcggtgctgctggca
gacccctgcttccagctgcgctccatccagtacctgctgggccacgccgagcccttggcc
ctggcagctgctcccccggccacggacaagcgccatttctccctgcacacctacacggag
tacatcagtgccgaggaactggcaaaggtggacaagatgctgagccacctgagtgaggag
tccaagcaggcggctgccaccacactgcccaccagcgaggaagatctgtgccccatctgc
tatgcacaccccatctcggccatcttcagaccctgctcccataagtcgtgcaaagcctgc
atcaaccagcacctgatgaacaacaaggactgcttcttctgcaaggccaccatcacaggg
gtggacgacttcaccaaacctgccagctcgtag
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