Caloenas nicobarica (Nicobar pigeon): 135994029
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Entry
135994029 CDS
T11056
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04137
Mitophagy - animal
cnic04140
Autophagy - animal
cnic04217
Necroptosis
cnic04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135994029 (SQSTM1)
04137 Mitophagy - animal
135994029 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
135994029 (SQSTM1)
04218 Cellular senescence
135994029 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135994029 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135994029 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135994029 (SQSTM1)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Mitophagy
Cargo receptors
135994029 (SQSTM1)
Pexophagy
135994029 (SQSTM1)
Aggrephagy
135994029 (SQSTM1)
Xenophagy
135994029 (SQSTM1)
ER-phagy
ER-phagy recepters
135994029 (SQSTM1)
Other autophagy associated proteins
Midbophagy
135994029 (SQSTM1)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
135994029 (SQSTM1)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135994029 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
135994029
NCBI-ProteinID:
XP_065500378
LinkDB
All DBs
Position
13:complement(7694631..7699137)
Genome browser
AA seq
461 aa
AA seq
DB search
MAALTVKAYLLGKEEAAREIRRFSLLPPARYQAIHDRVAELFHGLLRAGPPPAFRMHYKD
EDGDLIAFSTDEELEMAMPYVQDGIFRVYIKEKKECRREHRSQCSQEPPRDMVHPNVICD
GCEGAVVGARFKCTVCPDYDLCSTCEGKGIHKEHNMVMFQSPLLNPFESHGHHPLQWLPR
GRWLRKMRHGVPPFPWMHCWGYPGPAVPCPNSEQAQAGAAASSPPAAEEASTNSQPQDPN
VTFLKNVGESVAAFLSPLGIEVDIDVEHGGQRSKVTPASPSQEKNSAEASSSTLNQNVQT
KPDWNNTDSAPEVNTVAEQIQDMVIDPVPTQMEDGSFQSQEHSESSSSSGGDEDWTHLSS
KEVDPSTGELQSLQMPETEGPSSLDVSQDPPQAGPTGLREAALYPHLPPEADPRLIESLS
QMLSMGFSDEGGWLTRLLQTKNCDIGAALDAIQYSKQPPHL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgacggtgaaagcctacctgctgggcaaggaggaggcggcccgcgagatc
cgccgcttctccctgctgccgcccgcccgctaccaggccatccacgaccgcgtcgccgag
ctgttccacgggctgctgcgggccgggccgccgcccgccttccgtatgcactacaaggat
gaagacggggacctgattgctttttccaccgacgaggagctggagatggcgatgccttac
gtgcaggacggcatcttccgtgtttacatcaaagagaaaaaggagtgcaggcgggaacat
cgctcgcagtgcagccaggagcctccccgtgacatggtgcaccccaatgtcatctgtgat
ggctgcgaaggagcggtggtgggtgccaggttcaagtgcactgtctgtccagactatgac
ctgtgcagcacttgtgagggtaaaggtatccacaaggagcacaatatggtgatgtttcaa
agtccactgctaaatccatttgagtcacatggacatcaccctttacagtggcttccccga
ggacgctggcttcgtaaaatgcggcatggtgttccacccttcccatggatgcactgctgg
ggataccctggccctgcagttccatgcccaaactctgaacaagcccaagctggtgctgca
gcctccagtccacctgctgcggaagaagcttctactaacagccagcctcaggaccccaat
gtcaccttcttaaagaatgttggggagagtgttgcagcttttctgagccccttgggtatt
gaagttgatattgatgtggaacacggaggacagagaagcaaagtgactcctgcttctccc
agtcaagagaagaacagtgctgaggcgagcagcagtactcttaatcagaatgttcagacc
aaaccagactggaataacacagattctgctccagaagtaaatactgttgcagagcagata
caagacatggtcatcgatcctgtgcccacacaaatggaagatggcagcttccagtcccag
gaacacagtgagtccagcagttcttcagggggtgatgaggactggacccacttatcttcc
aaagaagtggatccttccacaggtgaactgcagtctctgcaaatgccagagacagagggt
ccgagctccctggatgtctctcaggatcctccccaagcaggacctacaggactgcgagaa
gctgcactctacccacatctcccaccagaagcagaccctcgcctcattgaatctctgtcc
cagatgctctccatgggtttctctgatgagggtggatggctcactcgactcctgcagaca
aagaactgcgacatcggggcagcactagatgccatccagtattccaagcagccacctcac
ttgtag
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