Caloenas nicobarica (Nicobar pigeon): 135994513
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Entry
135994513 CDS
T11056
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135994513 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135994513 (SMCR8)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135994513 (SMCR8)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
135994513
NCBI-ProteinID:
XP_065501157
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Position
14:complement(2695860..2706020)
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AA seq
934 aa
AA seq
DB search
MISAPDVVAFTREEELEDELYSEPPLPEEYSVPLFPFASHGANPWGKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPNDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSAEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLKQIRSYPYRKLKESEFHPYEPEAALDPAGVGCDQDLTTSDLTEPGPTHLY
SHVPSYTPKLIKAKSAKCFDKKLKTLEELCDIYFFTQTLDQLHQIERMFRGDVCYLLTDQ
ISRALLKQQSVTNFLFEDVSFLDEKRPEKQYRGCQELGQNAINRKCSEESSAPKVVISLG
SYKSSVESVPIKMEQELEDSHEPKMSESVTFEPQENLDYLDADIKGSISSGESIEVLGTE
KSAAGLPKSESQGSLPVSPSPQAGRSRVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYLDDDEDGGLRFAPKLNLGDADEREDLSQQESLTQVDSTCCIGKESPNFLEAE
LGQKPCDEEGVVRIPPQPSRPAEQGQRGTFGGFSSHDGISGGLLPCELDSRYPLGSQELS
KSSLDECSDSTSYMSSAASTCSDRTPSPAHLACQGSERHKKKAGQNALRFIRQYPFAHPA
IYSLLSGRTLVVLGEEENIVKKLVTALSIFVPNCGVYAKPVKHWVTSPLHVVDFQKWKLI
GLQRTVSPAGVNVLHTLSRYSRYVSILDADSKTLRCPLYKGTVVSRLADHRTQIKRGSTY
YMHVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVAKRRMNFLKLQLGLANEDIKIVQ
YLAELLKLRYIQEPGQGGNPVLRFDYVPSFLYKI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggcgttcaccagggaggaggagctggaggacgagctg
tacagcgagcccccgctgcccgaggagtactcggtgccgctcttccccttcgccagccac
ggcgccaacccctggggtaaggtcgccggctccaagttcacccgcgacttcatcctcatc
tccgagttctcggagcaagtggggcctcagcccctcctgaccatccccaacgatgccaaa
gtgtcgggcactttcgacctcaactatttttccctccggatcatgtctgtggattaccag
gcttctttcgtggggcacccgcccggctctgcttacccgaagctgaactttgtggaggat
tccaaggtggtgctgggggactcgaaggaaggagccttcgcctatgtgcaccacctgacg
ctgtatgacctggaagccaggggtttcgtcaggcccttctgcatggcctacatttctgcc
gacgagcacaaaatcatgcagcagtttcaggaactctccgctgagttctccaaagcctcc
gaatgcctgaagacggggaacaggaaagcttttgctaacgaactggaaaagaaactgaaa
gatcttgactacaccaggactgtcctgcacaacgaaactgagatacagaagaaagccaat
gacaaagggtattacaccacccaagccatcgagaaggccaatgagctggccagcgtggaa
aagtccatcatcgagcaccaagatctgctgaaacaaatccggtcatatccctacaggaag
ctgaaagaatccgaattccacccatatgagccagaggctgcgctggatccggccggcgtg
ggctgcgaccaggacctgactacctcggacctcactgagcccggcccaacgcacctttac
tcccacgtgccatcctatacccccaagctcatcaaagccaagtctgccaaatgctttgac
aagaagctgaagacactggaggagctctgcgatatttatttcttcacccaaaccctcgac
cagttgcatcagatcgagagaatgttcagaggcgatgtctgctacctcctgacggaccag
atcagcagagcgctcttgaaacaacaaagtgtaacaaacttcctctttgaggatgtctct
tttctggatgaaaaacgccctgaaaaacagtacagaggctgccaggagcttggtcaaaat
gccatcaatagaaagtgttcagaagagtcctccgctcctaaagttgtcatcagcctgggc
tcctacaagtccagtgtggagtccgtgcccatcaagatggagcaggagctcgaggactcc
cacgaacccaaaatgagcgaatctgtcacattcgagccccaggagaacctggactatctc
gacgctgatattaaaggcagcatcagcagcggcgagagcatcgaggtgctggggacggag
aaatctgctgcgggcttgccgaaatcggagagccagggcagcctccctgtgagccccagc
ccccaggcgggcaggagcagggtgggcagccggcgcacggtcagtgaggacagcatcgag
gtgctcagcacctgcccctccgaatccctcatccccgaagatttcaaagcgagctaccca
agtgccattaacgaggaaccttacctggacgatgacgaagacggaggccttcgcttcgcc
cccaaattaaacctgggcgacgctgacgagcgggaagacctttcacaacaggaaagcttg
acgcaggttgattccacttgttgtatcgggaaggaaagtccaaacttcctcgaggctgag
ctgggccagaagccctgcgacgaggagggggtggtcaggatccccccacagccgtcccgc
ccggctgagcaagggcagcgtgggactttcgggggcttctcgtcccatgacggcatctcg
ggggggctccttccctgtgagctcgactcgcgctacccgctgggcagccaggagctcagc
aagagcagcctggatgagtgctcggattccaccagctacatgagcagcgccgcctccacc
tgctctgacaggaccccgtcccccgctcacctcgcctgccaggggagcgaaaggcacaaa
aaaaaggccgggcagaacgcactgcgcttcatccggcagtaccccttcgcccaccccgcc
atctactcgctgctcagcgggaggacactggtggtactgggggaggaggaaaacatcgtc
aagaagctggtgacggcgctttccatcttcgtgcccaactgcggggtgtatgccaagcct
gtgaagcactgggtaacttcccctctgcatgtggtggatttccagaagtggaagctgatt
ggactccagaggacggtgtcgcctgccggggtgaacgtcctgcacaccctgagccgctac
agccggtacgtcagcattctggacgccgacagtaagactctgcgctgcccactctacaaa
ggcaccgtggtgtcccggctggcagatcaccgcacgcagatcaagcgagggagcacctac
tatatgcacgtccaaagtatcctcacccagctgtgttctaaagccttcctcttcaccttc
tgtcatcacttgcaccttcccatcagcgaaagggaaccggaggaatccgtggcgaagcgc
agaatgaactttctgaagcttcagctgggcctcgccaatgaagatatcaaaatcgtgcag
tatttagcggagctgctgaagctgcggtacattcaggaaccaggccagggggggaaccct
gtgctccgatttgactatgtccccagctttttgtacaaaatctag
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