KEGG   Caloenas nicobarica (Nicobar pigeon): 135994513
Entry
135994513         CDS       T11056                                 
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    135994513 (SMCR8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cnic04131]
    135994513 (SMCR8)
Membrane trafficking [BR:cnic04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    135994513 (SMCR8)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 135994513
NCBI-ProteinID: XP_065501157
LinkDB
Position
14:complement(2695860..2706020)
AA seq 934 aa
MISAPDVVAFTREEELEDELYSEPPLPEEYSVPLFPFASHGANPWGKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPNDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSAEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLKQIRSYPYRKLKESEFHPYEPEAALDPAGVGCDQDLTTSDLTEPGPTHLY
SHVPSYTPKLIKAKSAKCFDKKLKTLEELCDIYFFTQTLDQLHQIERMFRGDVCYLLTDQ
ISRALLKQQSVTNFLFEDVSFLDEKRPEKQYRGCQELGQNAINRKCSEESSAPKVVISLG
SYKSSVESVPIKMEQELEDSHEPKMSESVTFEPQENLDYLDADIKGSISSGESIEVLGTE
KSAAGLPKSESQGSLPVSPSPQAGRSRVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYLDDDEDGGLRFAPKLNLGDADEREDLSQQESLTQVDSTCCIGKESPNFLEAE
LGQKPCDEEGVVRIPPQPSRPAEQGQRGTFGGFSSHDGISGGLLPCELDSRYPLGSQELS
KSSLDECSDSTSYMSSAASTCSDRTPSPAHLACQGSERHKKKAGQNALRFIRQYPFAHPA
IYSLLSGRTLVVLGEEENIVKKLVTALSIFVPNCGVYAKPVKHWVTSPLHVVDFQKWKLI
GLQRTVSPAGVNVLHTLSRYSRYVSILDADSKTLRCPLYKGTVVSRLADHRTQIKRGSTY
YMHVQSILTQLCSKAFLFTFCHHLHLPISEREPEESVAKRRMNFLKLQLGLANEDIKIVQ
YLAELLKLRYIQEPGQGGNPVLRFDYVPSFLYKI
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgatcagcgcccctgacgtggtggcgttcaccagggaggaggagctggaggacgagctg
tacagcgagcccccgctgcccgaggagtactcggtgccgctcttccccttcgccagccac
ggcgccaacccctggggtaaggtcgccggctccaagttcacccgcgacttcatcctcatc
tccgagttctcggagcaagtggggcctcagcccctcctgaccatccccaacgatgccaaa
gtgtcgggcactttcgacctcaactatttttccctccggatcatgtctgtggattaccag
gcttctttcgtggggcacccgcccggctctgcttacccgaagctgaactttgtggaggat
tccaaggtggtgctgggggactcgaaggaaggagccttcgcctatgtgcaccacctgacg
ctgtatgacctggaagccaggggtttcgtcaggcccttctgcatggcctacatttctgcc
gacgagcacaaaatcatgcagcagtttcaggaactctccgctgagttctccaaagcctcc
gaatgcctgaagacggggaacaggaaagcttttgctaacgaactggaaaagaaactgaaa
gatcttgactacaccaggactgtcctgcacaacgaaactgagatacagaagaaagccaat
gacaaagggtattacaccacccaagccatcgagaaggccaatgagctggccagcgtggaa
aagtccatcatcgagcaccaagatctgctgaaacaaatccggtcatatccctacaggaag
ctgaaagaatccgaattccacccatatgagccagaggctgcgctggatccggccggcgtg
ggctgcgaccaggacctgactacctcggacctcactgagcccggcccaacgcacctttac
tcccacgtgccatcctatacccccaagctcatcaaagccaagtctgccaaatgctttgac
aagaagctgaagacactggaggagctctgcgatatttatttcttcacccaaaccctcgac
cagttgcatcagatcgagagaatgttcagaggcgatgtctgctacctcctgacggaccag
atcagcagagcgctcttgaaacaacaaagtgtaacaaacttcctctttgaggatgtctct
tttctggatgaaaaacgccctgaaaaacagtacagaggctgccaggagcttggtcaaaat
gccatcaatagaaagtgttcagaagagtcctccgctcctaaagttgtcatcagcctgggc
tcctacaagtccagtgtggagtccgtgcccatcaagatggagcaggagctcgaggactcc
cacgaacccaaaatgagcgaatctgtcacattcgagccccaggagaacctggactatctc
gacgctgatattaaaggcagcatcagcagcggcgagagcatcgaggtgctggggacggag
aaatctgctgcgggcttgccgaaatcggagagccagggcagcctccctgtgagccccagc
ccccaggcgggcaggagcagggtgggcagccggcgcacggtcagtgaggacagcatcgag
gtgctcagcacctgcccctccgaatccctcatccccgaagatttcaaagcgagctaccca
agtgccattaacgaggaaccttacctggacgatgacgaagacggaggccttcgcttcgcc
cccaaattaaacctgggcgacgctgacgagcgggaagacctttcacaacaggaaagcttg
acgcaggttgattccacttgttgtatcgggaaggaaagtccaaacttcctcgaggctgag
ctgggccagaagccctgcgacgaggagggggtggtcaggatccccccacagccgtcccgc
ccggctgagcaagggcagcgtgggactttcgggggcttctcgtcccatgacggcatctcg
ggggggctccttccctgtgagctcgactcgcgctacccgctgggcagccaggagctcagc
aagagcagcctggatgagtgctcggattccaccagctacatgagcagcgccgcctccacc
tgctctgacaggaccccgtcccccgctcacctcgcctgccaggggagcgaaaggcacaaa
aaaaaggccgggcagaacgcactgcgcttcatccggcagtaccccttcgcccaccccgcc
atctactcgctgctcagcgggaggacactggtggtactgggggaggaggaaaacatcgtc
aagaagctggtgacggcgctttccatcttcgtgcccaactgcggggtgtatgccaagcct
gtgaagcactgggtaacttcccctctgcatgtggtggatttccagaagtggaagctgatt
ggactccagaggacggtgtcgcctgccggggtgaacgtcctgcacaccctgagccgctac
agccggtacgtcagcattctggacgccgacagtaagactctgcgctgcccactctacaaa
ggcaccgtggtgtcccggctggcagatcaccgcacgcagatcaagcgagggagcacctac
tatatgcacgtccaaagtatcctcacccagctgtgttctaaagccttcctcttcaccttc
tgtcatcacttgcaccttcccatcagcgaaagggaaccggaggaatccgtggcgaagcgc
agaatgaactttctgaagcttcagctgggcctcgccaatgaagatatcaaaatcgtgcag
tatttagcggagctgctgaagctgcggtacattcaggaaccaggccagggggggaaccct
gtgctccgatttgactatgtccccagctttttgtacaaaatctag

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