Caloenas nicobarica (Nicobar pigeon): 135996783
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Entry
135996783 CDS
T11056
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135996783 (DHX9)
03012 Translation factors [BR:
cnic03012
]
135996783 (DHX9)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135996783 (DHX9)
5.6.2.6 RNA 3'-5' helicase
135996783 (DHX9)
Spliceosome [BR:
cnic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135996783 (DHX9)
Translation factors [BR:
cnic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135996783 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_19
ResIII
HMUD2
nSTAND3
AAA_14
Dicer_dimer
ATPase
AAA_22
Motif
Other DBs
NCBI-GeneID:
135996783
NCBI-ProteinID:
XP_065505087
LinkDB
All DBs
Position
20:3327343..3353825
Genome browser
AA seq
1232 aa
AA seq
DB search
MGDVKNYLYAWCRRRRLTPAYEIRAGGGRNRQTFLCELRVEGFNYIGMGSSTNKKDAQSN
AARDFVNYLVRVNEMKKGEIPAFGPAAGDTPDGHETAKDITGSSSTLGGPLPPHLIIEAE
TGNGAGAAPGSCGNHGVQWDRGANLKDYYSKREEQEVQATSESEMDLNTDLHGGWTLENA
KARLNQFFQKEKIQEEYKYTEMGPDHNRSFIAEMNIYVKQLGRRIFSREHGSNKKLAAQS
CACSLVRQLYHLGVIEPYSGQTKKKGESMEPYEVSLSSDLENQLRTTVRELSLETVPLPE
DPSKPVLINIGKLAHFEPSQRQNHMGVVPWSPPHCNWNPWTSCNIDEGPLANLTPEQISM
DLKNDFMYRLEQDQELQRIQQEREALPVKDFESEILDAIHHNSVIVIRGATGCGKTTQVP
QYILDEFIRTNRAAECNIVVTQPRRISAVSVAERVAYERGEQPGQSCGYSVRFESVLPRP
HASVMFCTVGVFLRKVEAGIRGISHVIVDEVHERDINTDFLLVVLRDVVQTYPEIRVIIM
SATIDTSMFCEYFFNCPIVEVFGRTYPVQDYFLEDCIQMTQFVPPPKEKKKKEKDEESGE
DDDANCNLICSDEYGPETKHSMAQLNEKETSFELIEALLIYIKTLNVPGAVLVFLPGWNL
IYTLQKHLEMNPRFGGRQYRILPLHSQIPLEEQRRVFDPVPPGVTKVILSTSIAETSITI
NDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCSRARF
ERLQTHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIELPPLDAVIEAERTLRELDAL
DSNEELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFISEGKRLGY
IHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEKRFCEHKRLSMATLRMTWEAKVQLKD
ILMNSGFPEECLMTQPFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGHNALI
HKSSVNCPFSSQDIKYPSPFFVFGEKIRTRAISAKAMTLVSPLQLLLFASKKVLSDGELV
LVDDWIKLKMPHSAAACITALRAAMEALVVEVTKDPETVRQLDPAKERMLDVIRQLSRPS
AAGVRLTAANARFGDGPRPPKMPRYDNGGWGGYPRGSGYRGGGYGGYGYSSWRSGGRGYQ
GSPGGGYYRGRGYRGAGGGYGGGCGDPGRGRW
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgtgaagaactacctgtacgcctggtgcaggaggaggaggctcaccccggca
tacgagatacgcgccggcggaggccggaaccgccaaaccttcctttgcgagcttcgagtg
gaaggctttaactacattggcatgggcagttccacaaacaagaaagatgcgcagagcaac
gctgctcgagactttgtcaattacttagttcgggtgaatgaaatgaagaaaggtgaaatt
cctgcttttggaccggcagctggtgatactcccgatggacatgaaacagctaaagacatt
actggttccagttctactttgggtggacctcttcctccgcatttgattatagaggctgaa
acaggcaatggcgcaggtgcagcacccggaagttgtggcaatcatggagttcagtgggat
cggggcgcaaatttgaaagattactattccaagagagaggagcaagaagtgcaggcaacc
tcagagtcagaaatggacttaaacactgatcttcacgggggctggaccctggaaaatgcc
aaggcacgtctgaaccagtttttccaaaaggagaagattcaggaagaatataaatacact
gaaatgggccctgatcacaacaggagctttattgcagaaatgaacatttatgtgaagcag
ctgggcagaaggattttcagccgcgagcacggatccaacaaaaagctggcagcacagtcc
tgtgcctgttccttggttaggcagctctaccatctcggcgtcatagaaccttattctgga
cagacaaagaaaaaaggagaatcgatggaaccctatgaggtgtcgctgtcttctgactta
gaaaaccagctgcgaaccactgtacgggaactgtctctggagactgtgcctttgcctgaa
gatcccagtaagccagttctgattaacattggaaagctggcccattttgaaccgtcgcag
agacaaaatcacatgggagttgttccgtggtcaccacctcattgcaactggaacccttgg
accagctgcaatattgatgagggtcctctggcaaatctcactccagagcaaataagcatg
gatttgaaaaacgatttcatgtaccgtttggagcaggatcaagaattacaaaggatccaa
caagagagagaggccttacccgtgaaggattttgaaagcgaaattctggatgcgatccat
cacaactctgtcattgtaatccgtggtgccaccggttgtggcaaaaccacgcaggtgcca
cagtacatcctggatgaattcatcagaaccaacagagctgcggagtgcaacatcgtggtg
acgcagcctcgaaggattagcgcagtttctgtagcagagcgtgtggcatatgagagagga
gaacaacctgggcaaagctgcgggtacagcgtgcgatttgaatctgtgcttcctcggccc
catgccagtgtgatgttctgcactgtaggtgttttcctgagaaaggtggaggctgggatc
cgtggcattagtcacgtcattgttgatgaggtccacgagagagacattaacactgacttt
ctcttggtggtgctgagagatgtggttcagacatatccagaaatcagggttatcatcatg
tctgccaccatcgatacaagtatgttttgtgaatacttcttcaactgtccgattgttgag
gtattcggtagaacctaccctgtccaagattattttctggaagattgcattcaaatgact
cagttcgttccgccaccaaaggaaaagaagaagaaagagaaggatgaagaaagtggtgaa
gatgatgatgccaattgcaaccttatttgcagcgatgaatatggtccagaaacaaagcac
tccatggctcagctgaatgagaaagaaacttctttcgaactcattgaggcgctgctaatt
tatatcaagacgctgaacgtcccgggagctgtacttgttttcttgcctggctggaacttg
atatacacattgcagaagcatctagaaatgaatccacgctttggaggccgccagtataga
attttacctctgcattcgcaaattcctctggaagagcagcgtcgggtgtttgatcctgtg
cctcctggagtcaccaaagttattttatctaccagcattgcggagaccagcattaccatc
aatgatgtcgtctatgttatagactcctgcaaacaaaaagtgaagctgttcaccgctcat
aataacatgacaaactatgccacagtctgggcatcgaaaactaatttggagcagcggaaa
ggaagagctggacgtgtgcgtgctgggttttgtttccatttgtgcagcagagctcgcttt
gaaagacttcaaactcatatgacacccgaaatgtttcgaacgccgctccatgaaattgct
ttgagcatcaaattgctgcggctgggaggaattggtcaatttttggccaaagcaatagag
ctgccacctttggacgcagtgattgaagcagaacgcacactaagagagcttgatgccctg
gattccaatgaagagttgacccctcttggaaggatcctggccaagcttcccattgaacct
cgtctgggcaagatgatgataatgggctgtattttttatgtgggagatgctgtttgtacc
atctctgcggccacctgtttccctgaacctttcatcagcgaaggcaaacgcctgggttac
atccacaggaatttcgctgggaacaggttttcggatcacgttgctttgctctccgtcttc
caagcctgggatgatgcaagaatgggtggtgaagaagcagaaaaaaggttttgtgaacac
aaaagactcagcatggctactctcagaatgacttgggaagcaaaagtccagctgaaagat
atacttatgaattctggcttccctgaagaatgtttgatgactcaaccgtttaacaacacc
ggcccagataataatctggatgttgtaatctccctgctcgctttcggggtctaccccaat
gtctgctaccacaaggagaagaggaaaattcttaccaccgaggggcacaacgccctcatc
cacaagtcatctgtcaactgcccgttcagcagccaggacatcaagtatccctcgcctttt
ttcgtttttggggaaaagattcgaacacgagccatctccgccaaagcaatgaccttggtg
agcccgctgcagctgctcctcttcgcctccaagaaagtcctgtcagatggggagctcgtt
ctggtggacgactggatcaagctgaagatgccgcacagcgcggctgcctgcatcactgcc
ctgcgtgcggccatggaggctcttgtcgtggaggtgaccaaagaccccgagaccgttcgg
cagctggacccagcgaaggagcgaatgctggatgtgatccgtcagctctccaggccatcg
gccgccggcgtccgcctgacggctgccaacgccaggttcggcgatggccctcgcccccct
aaaatgcctcgctatgacaatgggggctggggaggttacccgcggggctctggctaccga
ggcggaggctacggcggctacggctactccagctggcgctcaggaggcagaggataccaa
ggtagcccaggaggcggctattatcgaggaagaggctaccgaggagcaggcggtggctac
ggaggaggctgcggggatccggggaggggcaggtggtag
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integrated database retrieval system
