Caloenas nicobarica (Nicobar pigeon): 135997871
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Entry
135997871 CDS
T11056
Name
(RefSeq) T-cell surface glycoprotein CD4-like
KO
K06454
T-cell surface glycoprotein CD4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03250
Viral life cycle - HIV-1
cnic03260
Virion - Human immunodeficiency virus
cnic04060
Cytokine-cytokine receptor interaction
cnic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135997871
03260 Virion - Human immunodeficiency virus
135997871
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135997871
04514 Cell adhesion molecules
135997871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cnic04090
]
135997871
CD molecules [BR:
cnic04090
]
Proteins
135997871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
Tcell_CD4_C
ig
Ig_2
V-set_CD47
I-set
CD4-extracel
C2-set
Sema4F_C
Egh16-like
FtsX
Receptor_2B4
PMP1_2
Motif
Other DBs
NCBI-GeneID:
135997871
NCBI-ProteinID:
XP_065506863
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All DBs
Position
1:complement(87483463..87487308)
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AA seq
477 aa
AA seq
DB search
MESCGMVVSSTLAVVLVLHLGLISITAQQNEMQIGVAGQAVVLNCRGIPHHAAVTWKHYK
LVIKKSSTTTLKGKATMSDRSEIIPSNKHLKVMDLRLSDAGIYTCEYESHTVSISLHVFK
LMISLDGHFLPNEDLELTLMQNSSHPLPNLSITLFNSNNHIETPIVLEDKTHQKYTVKSK
QLEAADSGTWMCRVHSDSPLINQNISFDVKVLGFQNPDLERKYATVDSTVILSWRLNFQK
ITWKEGFTGQVNWKQQESAPAHELLDFNITAWGEQHKTKKSNRFWFEIPESKPGSTIEVK
LPKVHFNYSGQYQCQLAYNSRYVQSKIELVVMKVSANPVGPLPRGAEMTLTCQVSSPLPS
NTHLRWERVNGTQMDVKTSKQHEVKVEVNVSAAGLWICHLIEDNDLKISLSYSVEEAPVW
ISYVVIGASIGGSVLVFVLACLCTISGISWQRRRQRAKRMVQARQYLLENKTCQCQQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagtcatgtggcatggtggtgagcagcacacttgctgtcgtcttggttctgcatctg
ggtctgatctccattacggcacagcaaaatgaaatgcagattggggtcgcaggacaggca
gtcgtcttgaattgtagaggcatacctcatcatgcagctgtgacctggaagcactacaag
cttgttattaaaaagtcatctactaccactttgaaaggcaaagctaccatgagtgatcga
tcggaaatcatccccagcaataaacacctgaaggtgatggacttaaggctctctgatgct
ggcatctacacatgtgaatatgagtctcacacagtcagtatctcactacatgtcttcaaa
ttgatgatctctttagatgggcacttcctgccaaatgaagaccttgagttgactttaatg
caaaattcatcccatcctctacccaatctcagcatcacattgtttaacagtaacaaccac
attgaaacaccaatagtattagaagacaagacccatcaaaaatacacagtgaagtcaaag
caactggaggctgcggacagtgggacttggatgtgtcgtgtccattcagactctccattg
attaatcagaacatctcctttgatgtaaaggtattaggttttcagaatccagacttggaa
agaaagtatgcaactgttgatagcactgtcatcttgtcatggcgtctgaacttccagaag
ataacatggaaagaaggtttcacaggacaagtgaattggaaacaacaggaaagtgcacct
gctcatgaactacttgatttcaacatcacagcatggggagagcagcataagaccaaaaaa
agcaaccgcttttggtttgaaatacctgaaagcaaacctggaagcaccatagaagtgaaa
ctccccaaagtccatttcaactactctgggcagtaccagtgccagctggcatacaacagc
agatacgtgcagagcaagatagagctagtggtgatgaaagtctcagctaaccctgttggg
ccactccccagaggggccgagatgaccctgacctgccaggtctctagtccactcccatcc
aacacacatttgcgctgggaacgtgtgaatgggactcagatggacgtcaagacgtcaaag
cagcatgaagtaaaggtggaggtgaatgtcagcgctgcagggctgtggatctgtcacctc
atagaagacaatgacttgaagatcagcctcagttattctgtggaggaagctcctgtttgg
attagctatgtggtaattggagcaagtattggaggcagcgtgttggtgtttgtcctggcg
tgcctgtgcaccatcagcggtataagctggcagaggagaaggcaacgggcaaaaaggatg
gtacaagcacgacaatacttgctggaaaacaagacgtgtcagtgtcaacagtaa
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