Caloenas nicobarica (Nicobar pigeon): 135997915
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Entry
135997915 CDS
T11056
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04140
Autophagy - animal
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135997915 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135997915 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135997915 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135997915 (PLEKHM1)
Membrane trafficking [BR:
cnic04131
]
SNARE
SNARE associated proteins
Others
135997915 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
135997915 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_RRN7
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
135997915
NCBI-ProteinID:
XP_065506910
LinkDB
All DBs
Position
24:complement(2113620..2136546)
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AA seq
1023 aa
AA seq
DB search
MHSSHAGDPKEAIQLIKKQLVRAVKALQKRYASSDAAVTSDDGDANALCSALEAALVHGL
KAKHVKAESGGKGKKTGGRGPLPQPVFWGLLKSITHRNTVSELEQLIFINTDVGRCRAWL
RLALNDGLVECYLKLLLQDRARLPEYYQATALLLDAEECEFLLSYLQGLTSLTFQLSYKS
AVLNEWTVTPLSLSGLCPVWEQPEPPASEPRRKASLGSASQSSESDEVEIRPSALPIGRA
GGKAKLTASSLSLNTTSSSQLSSSLGSDSVPPHPCDSDLGTATNVDLDRSLQEVLSEFSK
AKPSLDVPEGEQVQNVLGCSPRPPVCPPAPAPAAPPQHPPPDTAQTGDTVTTSEGDGDAA
PQGSGTAGVSAPRRSAPGRGERDRGGTAGTGEGSPGVRSPTAEYLLSPLLGCPKRKSWIS
EDDFYRPSLGDGSERTATVNGFGPEGAGEGLAPGLISALDLERLSVPSSESGQPKMSPER
ERKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLELRLFLDHEDRIC
VESYSLLRCESLALTHSDGRFELVFLGKKLYLRAPSRDEAEDWLDRIREALHKCRPQLEE
EEWETLEYPEDGGDVQSDSTALPQYSDAPGNGLDWAPTHEPELDAIKEAVLYVDVDKTWV
PFVFSLSLETLKCFKVRNNDKILSNSYGIETIQDIVPDTSLGGPAFFKVITSKAVLKLQA
ENAAEAASWRELVRAVLMSYLESAEEALTLGGSLDGQSQVVLKNIVKENGFLLQYLVAIP
VEKGLDSQSFICAGCSRQIGFSFGKAKLCAFSGLYYCDSCHRDEETVIPSRLIHNWDLAK
RGVCRQALKFLTQIRNQPLIDLKLVNESLYDHVERMGRIRRSREQLKLLGDYLVMCRSGA
LKELSKRLDHRHYLLECPHKYSVADLRQIADGVFETFLQSLLQFASHHVYNCDLCTQRGF
ICQICNSSDIIFPFEFDTTARCSECKTVFHRDCHAGAKSCPRCERRRRYQRRLEVEASAE
PGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgagccacgccggtgaccccaaggaagccatccagctgatcaagaagcagctg
gtgcgggccgtcaaggcgctgcagaagcggtacgcgagctccgacgccgcggtcaccagc
gacgacggggacgccaacgcgctgtgcagcgccctggaagccgctctcgtgcacgggctg
aaggcgaagcacgtcaaggccgagagcggtgggaaagggaagaaaacggggggacgggga
cctctcccccagccggttttctgggggctgctgaagagcatcacccatcgaaataccgtc
tcggagctggagcagctcatctttatcaacacggacgtggggcggtgccgagcgtggctg
cggctggcgctgaacgatgggctggtggagtgttacctaaagctgctgctgcaggaccgg
gctcgcctgcccgagtattaccaggcgaccgctctgctcttggacgccgaagagtgcgag
ttcctcctcagctacctgcagggcttaacgtccttaaccttccagctttcctacaaatcg
gccgtgttgaacgagtggacggtcaccccgctgtccctgtcgggtctgtgtcccgtttgg
gagcagccggagcccccggcgtccgaaccgcgcaggaaagcgtcgctgggttccgcgtcc
cagtcgtcggagtcggacgaggtcgagatccgaccctctgctctccccatcggcagagcc
ggcggcaaagccaagctcacggcatcctcgctgagcctcaacaccaccagttcgtcccag
ctctcctccagtttgggctctgacagcgtccccccgcatccctgcgactccgacctgggc
acggccaccaacgtggacctggacaggtcgctgcaagaggtgttgtctgagttcagcaaa
gccaaaccgagcctggatgtcccggagggagagcaggtgcaaaatgtgctgggctgctcc
ccacggccacccgtctgccccccagcaccagcccccgcagctcctcctcagcacccgcct
cccgacaccgctcagacgggtgacacggtgacaaccagcgaaggggacggggacgcagca
ccgcaaggcagcggcacagccggggtttcggccccacggcgcagcgctcctggcagggga
gagagagacagaggtggcacagccggcaccggcgaggggagcccgggggtgcgcagcccc
acggccgaatatctcctgtccccgctgctggggtgtccgaaaagaaagagctggatctct
gaagatgatttctacagaccttctctgggagatggcagcgaacgcacggccaccgtcaac
ggcttcgggccggagggggctggcgaggggctggccccgggactcatcagcgccctggat
ttggaaaggctgtcggtgccgtcctcggagagcgggcagcccaaaatgtcaccggaacgg
gaacgaaagggcttcagcgttgtgcatcgccggcagatgggtctgtccaaccccttccgc
gggctcctgaagctgggcagcttggagcgccgcggagccatggggatctggaaggagttt
tcctgcgagctgtcgcccctggagctgcggctctttctggaccacgaggatcgcatctgc
gtggagagctactccctgctgcggtgcgagtcgctggcgctgacacactcggacggccgc
ttcgagctggttttcctggggaagaagctgtacctgcgggctccgtcgcgggacgaggct
gaggactggctggacaggatccgcgaggcgctgcacaagtgccgcccgcagctggaggag
gaggagtgggagacgctggagtatccagaagatggtggtgatgtccagagtgactccacc
gctctcccccagtacagcgacgcacctgggaatggcttggactgggctccaactcacgaa
ccggagctggacgcgataaaagaggctgttctgtacgtggacgtagacaaaacctgggtc
ccttttgttttttcgctgtctctggaaactttgaagtgctttaaagtcaggaacaatgac
aaaattttaagcaacagttacggtatagagaccatccaggacatcgttccggacacgagc
ctcgggggacccgcgttcttcaaggtgatcacctccaaagccgtcctgaagctgcaggcg
gagaacgcggcggaggcggcttcgtggagggagctggtccgggcggtgctcatgtcctac
ctggagagcgctgaggaggccctgacgctggggggcagcttggacggacaatcccaggtc
gtcctgaagaacatcgtgaaggaaaatggcttcttgttgcaatacctggtggccatcccc
gtggagaaggggctggactcgcagagcttcatctgcgcaggctgctccaggcagatcggc
ttctccttcggcaaagccaagctctgcgccttctccggcctctactactgcgacagctgc
caccgggacgaggagacggtgattccctcgcgcctcatccacaactgggacctggcaaaa
cgaggggtttgccggcaggctttgaaattcctcacccagatccgtaaccagcccctgatc
gacctgaagctggtcaacgagagcctctacgaccacgtggagaggatgggacggatccgc
cggagcagggaacagctgaagctgctgggagattatctcgtcatgtgccgcagcggcgcc
ctgaaggagctgagcaagcggcttgatcacaggcactacctcctggagtgtccccacaag
tacagcgtcgctgatctgaggcagatcgccgacggcgtctttgagaccttcctgcagtcc
ctgctccagttcgcgtcccaccacgtctacaactgcgacctctgcacccagcgaggcttc
atctgccagatctgcaacagcagcgacatcatttttcccttcgagttcgacaccaccgcc
aggtgcagcgaatgcaaaaccgtcttccaccgggactgccacgccggcgccaagtcgtgt
ccccgctgcgagcgccggcgcaggtaccagcggaggctggaggtggaggccagcgccgag
ccgggcctgtag
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