Caloenas nicobarica (Nicobar pigeon): 135998424
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Entry
135998424 CDS
T11056
Symbol
OGDH
Name
(RefSeq) 2-oxoglutarate dehydrogenase complex component E1 isoform X1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00020
Citrate cycle (TCA cycle)
cnic00785
Lipoic acid metabolism
cnic01100
Metabolic pathways
cnic01200
Carbon metabolism
cnic01210
2-Oxocarboxylic acid metabolism
Module
cnic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cnic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
135998424 (OGDH)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
135998424 (OGDH)
Enzymes [BR:
cnic01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
135998424 (OGDH)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
GGA_N-GAT
Motif
Other DBs
NCBI-GeneID:
135998424
NCBI-ProteinID:
XP_065507681
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All DBs
Position
25:complement(1567752..1599840)
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AA seq
1035 aa
AA seq
DB search
MLNLRTCAAKLRPLTASQTVKTISQHRLAAPRTFQQIRCYSAPVAAEPFLSGTSSNYVEE
MYYAWLENPKSVHKSWDIFFRNANAGAAPGTAYQSPLPLSTSLSTLSQAQFLVQAQPNVD
KLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSLPADIITSTDKLDLAVFKERL
RVLTVGGFYGLDESDLDKVFHLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFIN
DLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVL
IPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGD
VKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSI
LLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVAR
VVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLM
YKQIRKQKPVLQKYAELLISQGVVNQLEYEEEIAKYDKICEEAHARSKDEKILHIKHWLD
SPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMV
KNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHL
WPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQ
AKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYDCNWI
VVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDD
GPAAQSPERVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAEKY
PVAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQR
LLDTAFNLDAFKDLA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacttaaggacttgtgcggcaaagctgaggccgttgacggcctcacagactgta
aaaacaatttcccaacacaggctggcagcgcccaggacgtttcaacaaatcaggtgctac
agcgcaccagtggctgccgagccttttttgagcgggactagttcaaactacgtggaggaa
atgtattatgcatggctggaaaatcccaaaagtgtacataagtcatgggacatcttcttt
cgcaacgccaatgccggagctgctccaggcactgcttaccaaagtcccctgccactgagc
accagcctttccaccctgtcccaagcccagttcctggttcaagcgcagcctaatgtggat
aagctggtcgaggaccatctcgcagtgcaatcgctcatcagggcgtatcagattcgaggg
catcatgtagcacaactcgacccactgggcatcttggatgcagatctggactcctccctt
ccagccgatattatcacatccacagataaactggacctcgcagtgttcaaggagcggctg
agagtgttaacagtaggaggcttttacgggctggatgaatccgatctcgacaaggttttc
catttgcccacaaccactttcatcggtggaaatgaatcggctcttccgctgcgggaaatc
atccgtcgcctggagatggcgtactgccagcacattggcgtggagttcatgttcatcaac
gacctggagcagtgccagtggatccggcagaagtttgagaccccgggcatcatgcagttc
actaacgaagagaaacgcacactgctggccaggctggtccgctccaccaggtttgaggaa
ttcctccatcggaaatggtcttcggagaagcgttttggtctggagggctgcgaagtgtta
atcccagccttaaagaccattattgataagtcaagtgagaagggagtggattacgtgatc
atggggatgccccacaggggacggctgaatgttcttgccaacgtgatcaggaaagagctg
gagcagatcttctgccagttcgactccaagttggaggcggctgatgagggctctggtgac
gtgaagtaccacctgggaatgtaccaccggcggattaaccgcgtcaccgacaggaacatc
accctttccttggtggcaaatccttcgcatttggaggcggctgatcctgttgttcaaggc
aagactaaagcggagcagttttactgcggggacacagaggggaagaaggtgatgtccatc
ctcctgcacggagatgctgcatttgctggccagggcatcgtgtatgagacattccacttg
agcgacctgccctcctataccacccacggcaccgtccacgttgtggtgaacaaccagatc
ggcttcacgacagacccccggatggcccgttcctccccgtaccccaccgatgtcgcccgt
gtcgtcaacgcccccattttccatgtcaacgcggacgacccggaggccgtcgtctacgtc
tgcaatgtggcagccgagtggcgaagcaccttccacaaggacgtggtggtggatttggtt
tgttacaggcgcaacggtcacaacgagatggacgaacccatgttcacacaacccctgatg
tacaaacagatccggaaacagaagccggtgctgcaaaaatacgcggagctgctgatttcc
cagggagtggtaaatcagctggagtacgaggaggaaattgccaaatacgacaagatctgt
gaggaggcccatgcaagatccaaggatgaaaaaatcttgcacatcaagcactggctggac
tccccctggcctggtttcttcactttggacggccaacctcggagcatgacctgcccttcc
accggtttgaacgaagaggatttgacacacatcgggcaagtggccagctcggtgccggtg
gaggatttcactatccatggaggtttgagccgtattctgaaaacccgcggggagatggtg
aagaaccggacggtggactgggccctggcagagtacatggcgtttggctccctgctcaag
gagggcatccacatccgcctgagtggccaggatgttgagagggggacgttcagccatcgc
caccacgtcctgcatgaccagaacgtggacaagaggacctgcatccccatgaaccatctc
tggcccaaccaggctccttacaccgtctgcaacagctcgctgtcggagtacggcgtcctc
ggatttgagctgggtttcgccatggcaagccccaacgccctggtgctctgggaagctcag
tttggggatttccacaacaccgctcagtgcatcatcgaccaattcatctgccctggccag
gccaagtgggtcaggcagaacggcatcgtcctgctgcttccccacggcatggagggcatg
ggtcccgagcactcctctgcgcgcccggagcgattcctgcagatgtgcaatgacgatcct
gacgtcttccctaaactggacgattttgacgtgcgccagctctatgactgcaactggatt
gttgtcaactgctccactccggccaacttcttccacgtcctgcggcgccagatcctcctg
cccttccgcaaaccgctgatcatcttcactccaaagtcgctgctgcgtcatcccgaagcc
cgctccagcttcgatgacatgctgccaggcacccacttcctccgcgtcatccccgacgat
ggccccgcggcgcagagccccgagcgggtgaagcgcgtcctgttctgcaccggcaaagtt
tattacgacctgacgcgcgagcgcaaggcccggcagatggaggcggacgtggccatcacc
cgcgtggagcagctctccccgttccccttcgacctcctccagcgagaagccgagaaatac
ccagtggccgagctggtgtggtgccaggaggagcacaagaaccagggctactatgattac
gtcaaaccgcggctccgcaccaccatcaaccgcgccaagcccgtctggtatgcggggcgg
gaaccggcggccgcccccgccactggcaacaagaagacgcacctgacggagctgcagcgg
ctgctggacacggccttcaacctcgacgccttcaaggacctggcctga
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