KEGG   Caloenas nicobarica (Nicobar pigeon): 136001376
Entry
136001376         CDS       T11056                                 
Name
(RefSeq) interferon-like
  KO
K05415  interferon beta
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04060  Cytokine-cytokine receptor interaction
cnic04217  Necroptosis
cnic04620  Toll-like receptor signaling pathway
cnic04621  NOD-like receptor signaling pathway
cnic04622  RIG-I-like receptor signaling pathway
cnic04623  Cytosolic DNA-sensing pathway
cnic05164  Influenza A
cnic05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    136001376
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    136001376
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    136001376
   04621 NOD-like receptor signaling pathway
    136001376
   04622 RIG-I-like receptor signaling pathway
    136001376
   04623 Cytosolic DNA-sensing pathway
    136001376
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    136001376
   05168 Herpes simplex virus 1 infection
    136001376
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cnic04052]
    136001376
Cytokines and neuropeptides [BR:cnic04052]
 Cytokines
  Interferons
   136001376
SSDB
Motif
Pfam: Interferon DUF3963
Other DBs
NCBI-GeneID: 136001376
NCBI-ProteinID: XP_065511717
LinkDB
Position
Z:8757952..8758683
AA seq 243 aa
MAAPDTPRPRLPHGAPALLLLLTALATATACHHLRPRHATFPWDSLQLLQAMAPSPTQPC
HRQHAPSFPDTLLNTPRSQQPAAALAILQHLLQILSSNNIPQHWHHQPRDHLLNSLHHFI
HHLEHCLTHNRTLFRRQGPRNLLLTIHKYFGDIQDFLRTHSYSACAWDHVRLQAHACFQL
MDELMGQMKSRTAPALHQTRLRPTPIPSQHQRLQTEQRPQQPGLGWLSAAPTAPRQEPTA
TRA
NT seq 732 nt   +upstreamnt  +downstreamnt
atggctgcgcccgacaccccacggccccgcctgccgcacggcgccccggcgctcctgctc
ctcctcacggctctcgccaccgccaccgcctgccaccacctgcggccccgccacgccacc
ttcccctgggacagcctccagctcctccaggccatggctcccagccccacacagccctgc
caccgccagcacgcgccctccttccccgacaccctcctcaacaccccccgctcgcaacaa
cccgccgccgccctcgccatcctccagcacctcttgcaaatcctcagcagcaacaacatc
ccccagcactggcaccaccagccacgggaccacctcctcaacagcctccaccatttcatc
caccacctggagcactgcctgacacacaacaggacgctcttcagaaggcaagggccccgc
aacctgctgctcaccatccacaaatacttcggggacatccaggacttcctccgcacccac
agttacagcgcctgcgcctgggaccacgtccgcctccaagctcacgcctgcttccagctc
atggacgaactcatggggcagatgaagagccgaaccgctcctgccctccaccaaacccgc
ctgcgcccaacgcccattcccagccaacaccagcggctgcagacggagcagaggccgcag
cagcccgggctgggatggctcagcgccgctcccaccgctcccagacaggagccgacggcg
acacgggcgtga

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