Caloenas nicobarica (Nicobar pigeon): 136001788
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Entry
136001788 CDS
T11056
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136001788 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
136001788 (C9orf72)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
136001788 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
136001788
NCBI-ProteinID:
XP_065512508
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All DBs
Position
Z:71354453..71369701
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AA seq
481 aa
AA seq
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MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAECGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDILHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgcccaccaccatctcctgcagttgctaaaacagagatctctttgaat
ggcgaatcacctttgttagctgccacttttgcttactgggacaatattcttggcccccga
gtgcggcatatctgggccccaaagacagaacaggtacttctcagtgatggtgaaataact
tttcttgctaaccacaccctgaatggagaaatactccggaatgcagaatgcggtgcaata
gatgtgaagttcttcgtcttggcagaaaaaagggtaataattgtgtcattaatctttgat
ggaaactggaatggggacagaagcacatatggactatcaattatacttccacaaagtgaa
cttggcttctacctgccgcttcacagagtgtgcgtggataggttaacacatattataagg
aaaggaagaatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacggagagaatggaggatcagggccagagcatcattccaatgctgacaggagaagtt
attcctgtaatggaactcctttcatctatgaaatcacacagtgttccagaagaaatagat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagttcacacctgcagacctgtggttgttctgtagttgtaggaagcagt
gcagaaaaagttaataagattgtgagaacattgtgcctgtttcttacaccatcagagcgg
aagtgttccaggctctgtagaaatgagtcgtctttcaaatatgaatcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccgtatcctactacacatatagatgtagatgtcaatacagtgaagcagatgccgcct
tgtcatgaacacatctataaccaacgacgatacatgagatccgagctgacagcgttttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacacagatgagagtttc
acacctgatttaaatgtctttcaagatatcctgcatcgagatacattagtaaaagccttc
ctggatcagatctttcatctgaagcctggcttgtctctaaggagtactttccttgcacaa
tttcttctagtccttcacagaaaagccttaactttaataaaatacatagaggatgacacg
caaaaaggaaaaaaaccttttaagtctcttcgtagcttaaagatagatcttgacttaaca
gcagagggcgatcttaacataataatggctttggctgagaagatcaagccaggtctacat
tcctttatctttgggaggccgttctacactagtgtacaagaacgtgatatgctcatgaca
ttttaa
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