Caloenas nicobarica (Nicobar pigeon): 136002044
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Entry
136002044 CDS
T11056
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00280
Valine, leucine and isoleucine degradation
cnic00650
Butanoate metabolism
cnic00900
Terpenoid backbone biosynthesis
cnic01100
Metabolic pathways
cnic03320
PPAR signaling pathway
Module
cnic_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
136002044 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
136002044 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
136002044 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
136002044 (HMGCS1)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
136002044 (HMGCS1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Cullin
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
136002044
NCBI-ProteinID:
XP_065512939
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All DBs
Position
Z:complement(23444556..23454669)
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AA seq
541 aa
AA seq
DB search
MRGPRRRQAAMGFRNVSTTMPGSLPVNTESCWPKDVGIVALEIYFPSQYVDQTELEKYDG
VDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKS
KSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIA
VYATGNARPTGGAGAVAMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLS
IQCYLSALDRCYTVYRNKIHAQWQKEGTDRRFTLNDFGFMIFHSPYCKLVQKSVARLLLN
DFLSDQNSETANGVYTGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQ
NGNMYTPSVYGCLASLLAQYSPEQLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDK
ITASLSDLKTRLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVEDLFEGTWYLVRVDE
KHRRTYARRPLVGDGPLEAGVEVVHPGIVHEHIPSPAKKVPRIPATTESEGVTIAISNGE
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcccgaggcgccggcaggcggccatgggattccgcaacgtatctaccacgatg
cctggctctcttccagtgaacactgaatcctgttggcccaaagatgtgggaattgttgca
ctggaaatatatttcccatctcagtatgttgaccagacagagctggagaagtatgatggc
gtggatgctgggaaatacaccattgggctgggccagtcaaagatggggttctgctccgac
cgggaggatatcaattctctctgcttgactgtggttcagaagctcatggagaggaacagc
ctttcctatgattgtatcgggagattagaagttggaacggagacaataattgataaatca
aaatccgtaaagactgtcctgatgcagctttttgaagaatctggtaatacggatgtagaa
ggaatcgacaccaccaatgcgtgctatggaggcactgctgctctttttaatgctattaat
tggattgagtccagttcctgggatggacgctacgcactcgttgttgctggagacatagcg
gtatatgccactggaaatgccaggccaacaggtggagctggtgctgttgctatgctggtt
ggtccaaatgctccgttaatttttgagagagggctgcgtggaacccacatgcagcatgca
tatgacttctataaaccagatatggtttctgaatatcctgtagttgatggcaaactgtct
atacagtgctacctcagtgcattagatcgctgctatactgtctatcgcaacaaaatccac
gctcagtggcagaaggaggggacagacagacgtttcaccttgaatgactttggattcatg
atctttcattctccctactgtaaactggtgcagaaatctgtggctagactcttgctgaat
gattttctcagtgaccagaactcagaaacagcaaatggtgtttacactggtctggaagct
tttagggatgtaaaacttgaagatacatattttgacagagacgtggaaaaagcttttatg
aaagctagcgcagagctcttcaatcagaaaaccaaagcttcattacttgtatccaatcag
aatggaaacatgtataccccttcagtgtatggttgccttgcctctcttctagcccagtac
tccccagagcaacttgcgggacaaagaatcagtgtgttctcctatggctctggttttgct
gctacgctgtattccatcagagttacacaggatgccactcctggttctgcactggacaaa
ataactgccagcctttctgatctcaaaacaagacttgactcaagaaagtgtattgcacct
gatgtctttgctgaaaacatgaagatcagacaggaaacacatcatttggccaactatatt
ccacagtgctcggtagaagatctctttgagggaacctggtacctggtacgtgtggatgaa
aagcacaggagaacttatgcacggcgcccgctcgtgggggatggacctctggaggcagga
gttgaagttgtccacccaggcattgttcatgagcacatcccaagccctgctaagaaagtg
ccaagaatccctgcaacaacagaatctgaaggcgttactattgccatttccaatggggag
cattaa
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