Caloenas nicobarica (Nicobar pigeon): 136002433
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Entry
136002433 CDS
T11056
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00310
Lysine degradation
cnic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
136002433 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
136002433 (PRDM6)
03036 Chromosome and associated proteins [BR:
cnic03036
]
136002433 (PRDM6)
Enzymes [BR:
cnic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
136002433 (PRDM6)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
136002433 (PRDM6)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
136002433 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
136002433
NCBI-ProteinID:
XP_065513498
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All DBs
Position
Z:complement(32971319..33044639)
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AA seq
573 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGTLAQLQPPERADPSADSLRQRPA
SLSSASSSSSSSTPSSSSTSSCVAAAAASLAGLTCLPVSQLPVFGPLQSSEPSAGGAPAP
LQGKDLCGAGSGGSKCGERAAARFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGI
CAAQRIQQGTWIGPFQGVLLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSW
MRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQD
ENLNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSIVFPQTPCSRNFSLLDKSGSIESG
FNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQ
CGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERC
ERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgatcccggcggatccgcgttcctgaaggtggatcccgcttatctg
cagcactggcagcagcttttccctcagagcagccagctcaagagcagtgggaccctcgcc
cagctccagccgcccgagagagccgatccttcagctgacagcctacgccagcgcccggcc
tcgctctcctccgcctcctcctcctcttcctcgtccactccgtcttcctcctctacctcc
tcctgcgtcgctgcggcggccgcttccctggccggcttgacctgtctgcctgtgtcccag
ctcccggtcttcggaccgctgcagagctccgagccctcggccgggggagcgcccgctccc
ttgcagggcaaggacttgtgcggggccggcagcggcggcagcaaatgcggcgagcgcgct
gccgctcggttccggtgcacggccgaggagctggactactacctgtacgggcaacagcgc
atggagatcatccccttgaaccagcacaccagtgaccccaacaaccgatgtgacatgtgc
gctgacaaccgcaatggcgagtgccccatgcatggccccctccattccctgcggcgtctg
gtgggcaccagcagtgctgctgcagcggcccctccacctgagatccccgagtggctccgg
gacctgccccgagaggtgtgtctgtgcaccagcactgtgcctggcctggcctacggcatc
tgtgcagctcagcggatccagcagggaacctggattgggcccttccagggggtcctactc
ttgccagagaaggttcaagcaggagccatcaggaacactcagcatctctgggaaatatat
gaccaagatgggacactgcagcactttattgatggtggagaacccagcaagtcaagctgg
atgaggtatatccgatgtgcaaggcactgcggggaacagaatttaacagtggttcagtac
aggtcaaatatattctaccgggcttgcatagatatccccaggggcaccgagctgttggtg
tggtacaatgacagctacacatctttctttggaatccctctccagtgcattgcacaagat
gaaaatttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacag
ccatttaataaaagtagcaaactatcccctgccactccacagcgatccatagtatttcca
cagactccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcagga
tttaaccagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaa
ctaaattctgagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttc
acccagcggatcctcttacagatgcatgtgtgtacgcagaaccctgacaggccctaccag
tgtggtcactgctcccagtctttctcccaaccttcagagctgaggaaccacgtagttaca
cactccagcgacaggcctttcaagtgtggctactgtggtcgtgcctttgctggtgccaca
actctcaacaatcacatccggacacacactggggagaagcccttcaagtgcgagaggtgt
gagaggagcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgc
aagccaataacagagagcacagaatcaattgaagtggattaa
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integrated database retrieval system
