Chryseobacterium nakagawai: EG343_00740
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Entry
EG343_00740 CDS
T06300
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cnk
Chryseobacterium nakagawai
Pathway
cnk01501
beta-Lactam resistance
cnk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG343_00740
01503 Cationic antimicrobial peptide (CAMP) resistance
EG343_00740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnk02000
]
EG343_00740
01504 Antimicrobial resistance genes [BR:
cnk01504
]
EG343_00740
Transporters [BR:
cnk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EG343_00740
Antimicrobial resistance genes [BR:
cnk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EG343_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Pec_lyase_N
Motif
Other DBs
NCBI-ProteinID:
AZA89260
UniProt:
A0AAD0YHL1
LinkDB
All DBs
Position
168020..171166
Genome browser
AA seq
1048 aa
AA seq
DB search
MIKNFINRPVLSTVISILIVILGVLGLISLPVTQYPDIAPPTVSVSANYTGANAETVMKS
VVVPLEEQINGVEGMDYITSSAGNDGSAQIQVFFKQGIDPDIAAVNVQNRVARATPLLPS
EVTRSGVVTQKQQTSALMYMSFYSENKDLDDVYLQNFLNINIIPNLKRVNGVGDANVFGG
KNYSMRIWLDPAKMAAYSVTPTDVTNAINEQSREAAAGSIGQNSGSSFEYIIKYVGKFND
KEQYDNIIIKSLANGQNLMLKDVAKVELAGQSYTGIGENGNSPSISMGIFQTPGSNAQEI
IKNIKTYLKSAESTFPKGIKYTFNFDTNEFLEASIEKVVHTLIEAFILVFIVVYIFLQDF
RSTLIPAIAVPVSIVGAFFFLNLFGYSLNLLTLFALVLAIGIVVDDAIVVVEAVHAKMEH
GISDAKKATVEAMDEITGAIISITLVMAAVFIPVTFITGPTGVFYQQFGITLIIAIIISA
INALTLSPVLCSLFLKPHAEHHAEYKNLNLLQKFFYKFNIAFKTTTERYGRGFVFLLRHK
WVTLVIFAVTGGILYWASGTMKKGFVPTEDRGIIFTDVQLPPGASMERTYNALKTLQAKA
LKVPGVQNVTISTGRGFLSGNGSNNGLAFVKLKPFDERKKDGQTSEDITKKLFGIVGAVP
DAKVVFFQPPSVPGFGNSAGFEMVLLDKSGGEYADLDNKTNEFIGKLMQRPEIQFAQTSF
NTKYPQYQMEINVPLSKQLGVSVNDILATMQGYIGGIYTADFTKYGKQFRVMVQALPENR
KNIENLNQLYVRTGSGIMSPISQFVTLKKAYGPQSVSRYNLFTSVKVTGANSDGYSSGDA
IAAVQQVADETLNQNYAVEFTGLTREELNSGSQTLLIFGLSLVFVYFILSAQYESYILPL
IVVISLPLGVMGAYFGQKIMGLENNIYFQIALIMLVGLLAKNAILIVEFAVQRRHHGETI
VMSAINAAKARVRPILMTSFAFIFGLLPLVLASGIGAVGNRSIATGAAIGLLIGTILGLF
VIPVLYVIFESIQEKIKPIKKEDINLAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaactttattaacagaccggttttatctaccgttatctcaatcttgattgtg
attctcggtgtgctaggactgatctcgttaccagttacacagtatcctgatattgcaccg
cctacagtaagtgtttctgccaactatacaggagctaatgcggaaactgtaatgaaaagt
gttgtagttcccttagaagaacaaatcaacggggtagaaggtatggactatattacttcc
tctgcgggaaatgatggttctgcccagattcaggttttctttaaacaaggaatagatcct
gatattgcagcagtaaacgtacaaaaccgtgtggccagagctacacctttattgccgtcc
gaagtgacgcgttcaggggttgtaactcaaaagcaacagacgagtgccctgatgtatatg
tctttctattctgaaaataaagatcttgatgatgtataccttcagaactttttgaatatt
aatattattccaaacctgaaaagggtaaatggtgtaggggatgccaatgttttcggaggt
aaaaactattccatgagaatctggctggatcctgcaaaaatggctgcctacagtgttact
cctacggatgttaccaacgcgatcaacgagcagagtagagaagctgctgcgggctctatt
ggtcagaacagtggaagttcttttgaatatattatcaaatatgtaggtaaattcaatgat
aaagaacaatacgataatatcatcattaaatctcttgcaaacggacaaaatcttatgctt
aaagacgttgctaaagtagaattggcaggtcagtcttatacaggaatcggggagaacgga
aacagtccttccatcagtatggggatcttccagacaccgggttccaatgcacaagagatt
attaaaaatatcaaaacgtatctaaaatctgcagaaagtactttccctaaaggaattaaa
tatacttttaactttgataccaacgaattcttagaagcttctattgaaaaagtagtacat
acgctgattgaagctttcatcctggtgtttattgtagtatatatattccttcaggacttc
agatcaaccttgattccggccattgcggttccggtatctattgtaggggcgttcttcttc
ctgaatttattcggatactcattaaacctgttaaccctttttgcattggtacttgccatt
ggtattgtggtggatgacgccattgtcgtcgtcgaggctgttcatgcgaagatggagcac
ggtatttcggatgctaaaaaagcaacggtggaagcgatggatgagattacaggagctatt
atttctattactttggtaatggcagcggtatttattccagtgacgtttattacaggccct
acaggggtattctatcaacagtttggtattacgttaatcatcgcgattatcatttctgcg
atcaacgcattaacgttgagcccggtgttatgttcattattcctaaagcctcacgcagaa
catcatgcagagtataagaatttaaatctgctacagaagtttttctacaaatttaatatt
gcttttaaaacaacaactgagcgttacggaagagggtttgtatttctgttaagacataaa
tgggtaaccttagtaatctttgcggttacaggaggtattttatattgggcaagcggaacc
atgaaaaaaggttttgttcctacagaggatagaggaattatctttactgatgttcagctt
cctccgggtgcttctatggaaagaacgtataatgctttgaaaacccttcaggctaaagca
ttgaaagttccaggagtacaaaatgtaacgatttctacaggtagaggattcttatccgga
aacggaagtaataatggtcttgcctttgttaaactgaaaccatttgacgaaaggaaaaaa
gatggtcagacttctgaagatattaccaaaaagctatttggaattgtaggagctgtacct
gatgctaaagtagtattctttcaaccaccaagtgtaccaggatttggtaacagtgcaggt
tttgaaatggtattgctggacaaatcagggggagaatatgctgacctggataataaaacc
aatgaattcatcggtaaattgatgcagagacctgaaattcagtttgcgcagacttcattt
aacacaaaataccctcagtatcagatggagatcaatgttcctctgagcaagcagcttggg
gtttcagtaaatgatattctggcgaccatgcaagggtatatcgggggtatttatactgcc
gactttacaaagtatggaaagcagtttagggtaatggttcaggcacttcctgaaaataga
aagaacatcgaaaatctgaatcagctctatgtcagaacaggatcaggtatcatgtctcct
atttcgcagtttgtaacattgaaaaaagcatatggaccacaatctgtaagccgttataac
ctgtttacctcggtaaaggtgacaggagcaaactctgacggatacagttccggggatgct
attgctgctgtacaacaagtggccgatgaaaccctgaatcaaaattatgcagtagaattt
acagggttaaccagagaagaattaaattcaggatctcagacccttctgattttcgggcta
agtttggtttttgtttattttatcctttctgcacagtatgaaagttatatccttccacta
atcgttgttatctctcttcctcttggggtaatgggagcttatttcggacagaagattatg
ggcttggaaaataatatttatttccagattgccctgatcatgctcgtcggattgttggcg
aaaaatgcaatccttattgttgaatttgcagtccaaagaaggcatcatggtgaaacaatt
gtaatgtctgctattaatgcggccaaagcgagagtaagaccgattttgatgacctcattt
gcctttatctttggtttattaccgttggtgcttgcaagtggaattggtgctgtaggtaac
agatcaattgcaacaggagcagctataggattgttgataggtactattttaggacttttt
gtaattccggtattgtatgtgatttttgaaagcatacaggagaaaattaagcctatcaaa
aaagaagatatcaatttagcagagtaa
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