Chryseobacterium nakagawai: EG343_21210
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Entry
EG343_21210 CDS
T06300
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cnk
Chryseobacterium nakagawai
Pathway
cnk01501
beta-Lactam resistance
cnk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cnk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG343_21210
01503 Cationic antimicrobial peptide (CAMP) resistance
EG343_21210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnk03036
]
EG343_21210
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnk02000
]
EG343_21210
01504 Antimicrobial resistance genes [BR:
cnk01504
]
EG343_21210
Chromosome and associated proteins [BR:
cnk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EG343_21210
Transporters [BR:
cnk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EG343_21210
Antimicrobial resistance genes [BR:
cnk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EG343_21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CzcB
HH_YBHG
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
Biotin_lipoyl
BSH_YhbJ
Beta-barrel_AprE
CzcB_C
RND-MFP_C
Beta-barrel_YknX
HH_CzcB
PTS_EIIA_1
TarH
Glyco_hydro_36C
HAUS6_N
Motif
Other DBs
NCBI-ProteinID:
AZA92934
UniProt:
A0AAD0YQG8
LinkDB
All DBs
Position
4621632..4622720
Genome browser
AA seq
362 aa
AA seq
DB search
MKTYFYSTLILGTLLLGSCSSDEKKSVQNADAPISVTISHTTAGSEGSSATASGKLVAKN
SVNVSTRMMGYITSMKAEVGQDVRAGQLLVSINAADIQAKGGQANAQISQAQASYNIARK
DYERFQNLYKSQSASQKELDDMRARYEMAQAGLQAAQQMKNEVNAQYSYTNVTAPISGTI
TAKFAEQGDMANPGMPLLTIESPSSLQAQVLVSEQNITMISNGMPVDVTLKSMNRTVSGT
VSEISRSAANTGGQYMVKINIHNTSDLLPGMFVNVQFPFKTSGKINQGFQESMMIPKTAL
VENGQLTGVYVVSAQNTAVLRWLKTGKTTGDQVEILSGLNPKETYIVSSTGKLYNGAKVQ
VK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatatttttattcaactttgattctgggcacgcttcttttgggaagctgttct
tcagacgaaaaaaaatccgttcagaatgctgatgcgcccatttctgttacgataagccat
acaacagcaggctcggaaggttcatctgctacagcgagcggaaaattggttgccaaaaat
tcagtcaatgtttctactcggatgatgggatatatcacatccatgaaggcagaagtaggg
caggacgttagggcaggtcaattattggtaagtattaatgcggcagatatccaggcaaaa
ggcgggcaggctaatgcacagatctcccaagcacaggccagctacaatattgccagaaaa
gattatgagagattccagaatctgtataaatcccaaagtgcttcccagaaagagctggat
gatatgagagcccggtacgaaatggcacaggcaggattgcaggccgcacagcagatgaaa
aacgaagtcaatgcacaatatagctataccaacgtaacggcacctatttccggaaccatt
acggcgaaatttgcagagcagggcgatatggccaatcccggaatgcctttgcttaccata
gagtcaccatcatctttgcaggcacaggttctggtttccgagcagaatatcaccatgatt
tccaacggaatgccggttgatgtcaccttaaaatcgatgaacagaaccgtttcaggaacg
gtgtcagaaatcagcagatccgcagccaataccggaggacaatatatggtgaaaatcaat
attcataatacttccgatttgcttccgggaatgtttgtgaatgtacagtttccttttaaa
acatcagggaaaatcaatcaggggtttcaggaaagtatgatgattcctaaaacggctttg
gtagaaaatggccagctcacaggagtttatgtggtaagtgcacaaaatacggcagtctta
agatggctgaaaactggaaaaacaaccggagatcaggttgaaatcctttcaggtttgaat
ccgaaagaaacttacatcgtttcttcaacaggaaaattgtataacggagcaaaagttcag
gtaaaatag
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