KEGG   Chionomys nivalis (European snow vole): 130862209
Entry
130862209         CDS       T11437                                 
Name
(RefSeq) RT1 class I histocompatibility antigen, AA alpha chain-like isoform X1
  KO
K06751  MHC class I antigen
Organism
cnl  Chionomys nivalis (European snow vole)
Pathway
cnl04144  Endocytosis
cnl04145  Phagocytosis
cnl04218  Cellular senescence
cnl04514  Cell adhesion molecule (CAM) interaction
cnl04612  Antigen processing and presentation
cnl04940  Type I diabetes mellitus
cnl05163  Human cytomegalovirus infection
cnl05165  Human papillomavirus infection
cnl05166  Human T-cell leukemia virus 1 infection
cnl05167  Kaposi sarcoma-associated herpesvirus infection
cnl05168  Herpes simplex virus 1 infection
cnl05169  Epstein-Barr virus infection
cnl05170  Human immunodeficiency virus 1 infection
cnl05203  Viral carcinogenesis
cnl05320  Autoimmune thyroid disease
cnl05330  Allograft rejection
cnl05332  Graft-versus-host disease
cnl05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    130862209
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130862209
   04145 Phagocytosis
    130862209
  09143 Cell growth and death
   04218 Cellular senescence
    130862209
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    130862209
   04612 Antigen processing and presentation
    130862209
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    130862209
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    130862209
   05170 Human immunodeficiency virus 1 infection
    130862209
   05168 Herpes simplex virus 1 infection
    130862209
   05163 Human cytomegalovirus infection
    130862209
   05167 Kaposi sarcoma-associated herpesvirus infection
    130862209
   05169 Epstein-Barr virus infection
    130862209
   05165 Human papillomavirus infection
    130862209
  09163 Immune disease
   05320 Autoimmune thyroid disease
    130862209
   05330 Allograft rejection
    130862209
   05332 Graft-versus-host disease
    130862209
  09166 Cardiovascular disease
   05416 Viral myocarditis
    130862209
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    130862209
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cnl04147]
    130862209
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cnl00537]
    130862209
Exosome [BR:cnl04147]
 Exosomal proteins
  Proteins found in most exosomes
   130862209
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cnl00537]
 Antigens
  130862209
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_C C2-set_3 Ig_3 Ig_2 LapA_dom DUF3377 ig Insulin_TMD C3orf18_N C2-set_2
Other DBs
NCBI-GeneID: 130862209
NCBI-ProteinID: XP_057607682
LinkDB
Position
19
AA seq 363 aa
MGAMAPRTLLLLLAAALAPTQTRAGSHSLRYFYTAVSRPGLGEPRFISVGYVDDTQFVRY
DSDAETPRMEPRAPWIEKEGPEYWELNTRNVKNAEQNFRVNLKTALGYYNQSEGGSHTFQ
WMYGCEVGSDGRLLRGYSQAAYDGHDYIALNEDLTTWTAADTAAQITKRKWERDGYAERQ
KAYVEGLCLQYLRRYLENGKAALLRSDPPKAHVTHHPGSKGDVTLRCRALGFYPASITLT
WQREEEEQTQDMELVETRPSGDGTFQKWASLVVPSGEEHKYTCHVYHEGLPEPLTLRWEP
PQSTVLIIAVIAGLVLLGVIIGAVVAVVRKRRRNTGGKGGNYAPAPGRDSSQSSDVSLPD
CKV
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgggggcgatggcgccgcgcacgctgctcctgctgctggcggccgccctggccccgacc
cagacccgcgcgggctcgcactcgctgcggtatttctacaccgccgtgtcccggcccggc
ctcggggagccccggttcatctctgtcggctacgtggacgacacgcagttcgtgcgctac
gacagcgacgcggagactccgaggatggagccgcgggcgccgtggatcgagaaggagggg
ccggagtattgggagctgaacacacggaacgtcaagaacgccgagcagaatttccgagtg
aacctgaagaccgcgctcggctattacaaccagagcgagggcggctctcacaccttccag
tggatgtacggctgtgaggtggggtcggacgggcgcctcctccgcgggtacagtcaggcc
gcctacgacggccacgattacatcgccctgaacgaggacctgacgacgtggacggcggcg
gacacggcggcgcagatcaccaagcggaagtgggagcgggatggttatgcagagagacag
aaggcctacgtggagggcctgtgcctgcagtacctgcgcagatacctggagaacgggaag
gccgcgctgctgcgctcagatcccccaaaggcacatgtgacccatcatcctgggtctaaa
ggtgatgtcaccttgaggtgcagggccctgggcttctaccctgcctccatcaccctgacc
tggcagagggaggaggaggaacagactcaggacatggagctggtggagaccagaccttct
ggggacggaaccttccagaagtgggcatctctggtggtgccttctggggaggagcacaaa
tacacatgccatgtgtaccatgaggggctacctgagcccctcaccctgagatgggagcct
cctcagtccacggtcctcatcatagcagtcattgctggtctggttctccttggagtgatc
attggagctgtggtggccgttgtgaggaagaggaggagaaacacaggtggaaaaggaggg
aactatgctccagctccaggcagggacagttcccagagctccgatgtgtctctcccagac
tgtaaagtgtga

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