Chionomys nivalis (European snow vole): 130881341
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Entry
130881341 CDS
T11437
Symbol
Thbs1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04015
Rap1 signaling pathway
cnl04115
p53 signaling pathway
cnl04145
Phagosome
cnl04148
Efferocytosis
cnl04151
PI3K-Akt signaling pathway
cnl04350
TGF-beta signaling pathway
cnl04510
Focal adhesion
cnl04512
ECM-receptor interaction
cnl04820
Cytoskeleton in muscle cells
cnl05144
Malaria
cnl05165
Human papillomavirus infection
cnl05205
Proteoglycans in cancer
cnl05206
MicroRNAs in cancer
cnl05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
130881341 (Thbs1)
04350 TGF-beta signaling pathway
130881341 (Thbs1)
04151 PI3K-Akt signaling pathway
130881341 (Thbs1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130881341 (Thbs1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130881341 (Thbs1)
04148 Efferocytosis
130881341 (Thbs1)
09143 Cell growth and death
04115 p53 signaling pathway
130881341 (Thbs1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130881341 (Thbs1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130881341 (Thbs1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
130881341 (Thbs1)
05205 Proteoglycans in cancer
130881341 (Thbs1)
09162 Cancer: specific types
05219 Bladder cancer
130881341 (Thbs1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
130881341 (Thbs1)
09174 Infectious disease: parasitic
05144 Malaria
130881341 (Thbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130881341 (Thbs1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cnl00536
]
130881341 (Thbs1)
Membrane trafficking [BR:
cnl04131
]
Endocytosis
Phagocytosis
Opsonins
130881341 (Thbs1)
Glycosaminoglycan binding proteins [BR:
cnl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130881341 (Thbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130881341
NCBI-ProteinID:
XP_057636872
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Position
9:complement(56675885..56691378)
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AA seq
1171 aa
AA seq
DB search
MELLWGLGVLFLLHVCGSNRIPESGADNSVFDIFELIGAARKGSGRRLVKGPDLSSAAFR
IENANLIPPVPDDKFQDLLDAVWADKGFIFLASLRQMKKTRGTLLAVERKDNSGQIFSVV
SNGKAGTLDLSLSLPGKQQVVSVEEALLATAQWKSITLFVQEDRAQLYIDCEKMESAELD
VPIQSIFTRDLAKVARLRVAKGDANDNFQGVLQNVRFVFGTTPEDILRNKGCSSSAANIL
LTLDNNVVNGSSPAIRTDYTGHKTKDLQAICGLSCDELSSMVLEFNSLRTVVKTLQDSIR
KVTEENRELASELRRPPLCFHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS
NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ
TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR
ETKACKKDACPINGGWGPWSPWDICSVTCGGGVQRRNRLCNNPTPQFGGKDCIGDVTENQ
VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECTEVPDAC
FNHNGEHRCKNTDPGYNCLPCPPRFTGTQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNK
NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCP
NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDWDRDDVGDRCDNCPY
NHNPDQADTDSNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLE
HNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNMDNCPYVPNANQADHDKDGKGDACDHDDD
NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRR
FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD
DDYAGFVFGYQSSSRFYVVMWKQVTQTYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA
LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMADSGPIY
DKTYAGGRLGLFVFSQEMVFFSDMKYECRDS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctctggggactaggtgtcctgttcctgttgcatgtgtgtggcagcaatcgc
attccagagtctggggccgacaacagtgtgtttgacatcttcgaactcattggagctgct
cgcaagggctcgggccgccgactggtgaagggccctgacctgtccagtgcagctttccgg
attgaaaacgccaacctgattccccctgtgcccgatgacaagttccaagacctactagat
gctgtgtgggccgacaaaggcttcatcttcctggcttccttgaggcagatgaagaagacc
cggggcacactcctggccgtggaacggaaagacaattccggccagatcttcagtgtggtc
tccaatggcaaagcaggcaccctggacctgagtctgagcctgccagggaagcagcaagtg
gtgtcagttgaagaagcgctcctggccactgcccagtggaagagcatcactctgtttgtg
caagaggaccgagcccagctctacattgactgtgagaagatggagagcgcagaactggac
gtccccatccagagcatctttaccagggatttggccaaggtcgccaggctccgcgttgcc
aagggagacgccaacgacaattttcagggggtgctgcagaatgtgaggtttgtctttgga
accaccccagaagacattctcaggaacaaaggctgctccagctccgctgccaacatcctt
ctgaccctcgacaacaacgtggtgaatggctccagccccgccatccgcaccgactacact
ggtcacaaaacaaaggacctgcaagccatctgtggcctctcctgtgacgaactctccagc
atggtcctggaattcaacagcctgcgcaccgtcgtgaaaacactacaggacagcatccgc
aaagtgacggaggagaatagagagctggccagcgaactgaggcggcctcccctctgcttc
cacaatggagttcagtacaggaacaatgaggaatggactgtggatagctgcactgagtgt
cactgccagaactcagttaccatctgcaaaaaggtgtcctgccccatcatgccctgctcc
aatgccaccgttcccgatggagaatgctgtccccggtgttggcccagcgactctgctgat
gacggctggtccccctggtctgagtggacttcctgctctgcgacatgtggtaatggaatc
cagcagcgcggtcgctcctgtgacagcctcaacaacagatgcgagggctcttcagtacag
acaaggacctgccacatccaggagtgtgacaagagatttaaacaggatggtggctggagc
cactggtccccatggtcgtcttgttctgtgacctgcggggatggcgtgatcacaaggatc
cggctctgtaactctcccagcccccagatgaatgggaagccctgtgaaggtgaagctcgg
gagaccaaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtca
ccatgggacatctgctctgtcacctgtggaggaggggtgcagagacgcaaccgactctgt
aacaaccccacaccccagttcggaggcaaagactgcattggtgacgtcactgaaaatcaa
gtttgcaacaagcaggactgtccaattgatggatgcctgtccaacccctgcttcgctggt
gccaagtgtaccagttatcctgatggcagctggaaatgtggcgcatgtcctcctggctac
agtggaaatggcatccagtgcaaagatgtcgatgagtgcacagaagtgcctgatgcctgc
ttcaatcacaatggagaacaccggtgtaagaacacagaccctggttacaactgcctgccc
tgcccgccacggttcactggcacccagccctttggcagaggggtcgaacatgccatggcc
aacaagcaggtgtgcaagccacgaaacccctgcacggatgggacacacgactgcaacaag
aatgccaagtgcaactacctgggccactacagtgaccccatgtaccgctgtgagtgcaag
cctggctacgcgggcaatggcatcatctgtggagaggacacggacctcgacggctggcct
aacgagaacctggtgtgcgtggccaatgcaacttaccactgcaaaaaggacaactgcccc
aaccttcccaactcagggcaggaagactatgacaaagatggaatcggtgatgcctgtgat
gacgacgatgacaatgacaaaatcccagatgacagggacaactgtccgttccattacaac
ccagcccagtatgactgggacagagatgacgtgggagaccgctgtgataactgcccctac
aaccacaaccctgaccaggcagacacagacagcaatggagagggggatgcctgcgctgtg
gacattgacggagatggcatcctcaatgaacgagacaactgccagtatgtttacaacgtg
gaccagaaggacactgacatggatggagttggagatcagtgtgacaattgccccctggag
cacaatccagaccagctggactctgactcagaccgcataggggacacctgtgacaacaat
caggacatcgatgaggatggccatcagaacaatatggacaactgtccctatgtgcctaat
gccaaccaggccgaccatgacaaagatggcaaaggagatgcctgcgaccatgatgatgac
aatgacggcattcctgatgacagggacaattgcaggctggtgcccaatcctgaccagaag
gactctgatggtgatggccgaggtgacgcctgcaaagatgactttgatcatgacagtgtg
ccagacattgatgacatctgtcctgagaacgttgacatcagtgaaaccgatttccgccgg
ttccagatgattcctctagatcccaaggggacctcccaaaatgaccctaactgggtcgtg
cgccatcagggcaaagagcttgtccagacagtgaactgtgaccctggtcttgctgtgggc
tatgatgagtttaatgccgtggacttcagtggtaccttcttcatcaacaccgagagggat
gacgactatgctggcttcgtgttcggctaccagtccagcagccgcttctacgtcgtgatg
tggaaacaagtcacccagacctactgggacaccaaccccacaagggctcagggatattcg
ggcctgtctgtaaaggttgtgaattccaccacggggcctggcgagcacctgcggaatgcc
ctgtggcacacaggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcac
ataggctggaaggatttcactgcttacaggtggcggcttagccacaggccaaagacgggt
tacatcagggtggtgatgtatgaaggaaagaaaatcatggccgactcaggacccatttac
gataaaacctacgctggcggtagactaggcctatttgtcttctctcaagaaatggtgttc
ttctcagacatgaaatacgaatgtcgagattcctaa
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