Chryseobacterium nepalense: M0D58_07960
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Entry
M0D58_07960 CDS
T08142
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cnp
Chryseobacterium nepalense
Pathway
cnp01501
beta-Lactam resistance
cnp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M0D58_07960
01503 Cationic antimicrobial peptide (CAMP) resistance
M0D58_07960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnp02000
]
M0D58_07960
01504 Antimicrobial resistance genes [BR:
cnp01504
]
M0D58_07960
Transporters [BR:
cnp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M0D58_07960
Antimicrobial resistance genes [BR:
cnp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M0D58_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UPQ77458
LinkDB
All DBs
Position
1851655..1854837
Genome browser
AA seq
1060 aa
AA seq
DB search
MLKQFIERPVLSTVISIILLLLGALSLFNLPIALFPDIAPPSVQVTAFYPGANAEVVARS
VATPIEEAVNGVENMTYMTSNSSNDGTMTLSVFFKQGSDPDNAAVNVQNRVSKAMSQLPQ
EVVQAGISTQKVQNSMIMFMGLTSNDPKQYDELFLQNYLKINIIPQIQRIPGVAQAQVFG
TRDYSMRLWLKPDRLAANNLSPQEVLNAVKDHNLEAAPGRLGQGSKETYEYILKYKGKLN
KNEDYENIAIKANSDGSFLRLKDVARVEFGSYTYTAANRVDGKPVSGFAIMQTAGSNANE
ILTEIEKQVDQFKTTLPKGVEPIIMYNSKDFLDASIHQVVETLVIAFILVFIVVYIFLQD
FRSTLIPAIAVPVAIIGTFFFLQLFGFSINMLTLFALVLAIGIVVDDAIVVVEAVHSKME
HTGMPVEHATMSSMSEISGAIISITLVMCAVFIPVGFMQGPAGVFYRQFAFTLAIAIMIS
AVNALTLSPALCAMFLNDPQGEHGEHGKKTGFGARFFNAFNVSFNNLTKKYIYSLKFLIK
NKWVAVGGLVLITAASIFLIKKAPSGFIPTEDQGFILYAVNTPPGSSLDRTHRATEQIDQ
IINGEKAKNHLWVADGLNFISNANASPYSAGFIKLKDHDQRGEVTDPDQIAAALTGKVSQ
VKDASAFFFNFPTVQGFGNVSGFEFMLQDKTNGSLENLGTTTQAFIGELMKRPEIAFAFT
TYAAGNPQFTIEVDSDKANQLGVSITELMQTMQIYYGSSFVSDFNRFGKYYRVMAQADIP
YRTDANSLEGIYVKNKSGEMVPVKTLVTLKRAFGPETVTRNNLFNAVTINGTPKPGYSTG
DAIKAVEEVAEKSLPRGFGYEWTGITREEIKTSGQTAFIFMLSILFVYFLLAAQYESYIL
PFAVILTIPTGIFGVFAFTGLAGIDNNIYVQVGLIMLVGLLAKNAILIVEFAVQRRNAGR
SLLESALQASRLRLRPILMTSFAFIVGMLPLVFTQGASAKGNHSIGFSTVGGMLTGVVFG
IFIIPVMFVIFQYLHEKMPSRKKKRLQRQKLEAELLATTH
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaatttatagaaagaccggtactttcaacggttatttccatcatactatta
ttattgggtgctttgtcgctctttaatttacccatcgccctctttccggatattgcgccg
ccgagtgttcaggtgaccgcgttttatccgggtgcgaatgcggaagttgtagcccgttcg
gtagcaactcctatcgaagaagcggtaaacggtgtggaaaacatgacctacatgacttcc
aactccagtaatgacggtaccatgacgctgagcgtatttttcaaacagggatctgatccc
gataatgcagcggtaaacgtgcaaaaccgtgtatcgaaagccatgagtcaacttccgcaa
gaggttgtacaggcgggaatttccacacagaaagttcagaacagtatgatcatgtttatg
ggattaaccagtaatgatcctaaacaatacgacgagcttttcttacaaaactatttgaaa
atcaatattattccacaaatccagcgtattccgggtgttgcccaggcgcaggttttcgga
acgagagattattccatgagactctggctgaagccggacagattagcagccaacaatctt
tctccacaggaagttttgaacgctgtgaaggatcataaccttgaagcagctcccggacgt
cttggacagggaagtaaggaaacgtacgaatatattttaaagtataaaggtaaattaaac
aaaaatgaagactacgaaaacatcgccatcaaagccaacagcgacggatctttcctgaga
ctgaaagacgtggcaagagtagaatttggttcctatacttatacagcagccaacagagtt
gacggaaaaccggtttcaggttttgcgattatgcagaccgctggatctaatgccaacgaa
atcttaactgaaattgaaaagcaggttgatcagtttaaaaccacccttccgaaaggtgtt
gaaccaatcatcatgtacaactccaaagacttcttggatgcttctattcatcaagtggtt
gaaacgttggtcattgcctttattctggtatttatcgtagtgtatattttccttcaggat
ttcagatctactttaattcctgcgattgccgttccggtagcgatcattggtacgttcttc
ttccttcagctatttggattcagtatcaatatgttgaccctgttcgcattggtactcgcc
atcggtattgtggtggatgatgccatcgttgtggtagaggctgttcactctaaaatggaa
catacaggaatgccagttgagcacgcaacaatgagctcaatgagtgaaatttccggagct
attatttccattacattggtgatgtgtgctgtatttattccggttggcttcatgcagggt
cctgcgggagttttctacagacagtttgcctttacattagctattgcgattatgatttct
gcggtgaatgcattgacattaagtcctgctttatgtgcgatgttcctaaatgatcctcag
ggtgagcacggagagcacggtaaaaaaacaggctttggtgcaagattctttaatgcattt
aatgttagctttaataatttaactaaaaaatacatttacagccttaaatttttaattaaa
aataaatgggttgccgtaggaggattggtattaattactgccgcaagtattttcttaatt
aaaaaagcaccgtcaggatttattcctacagaagaccagggatttattttatatgcggtg
aatacacctccgggaagttcattggacagaacccacagagcaaccgaacaaatcgatcaa
attatcaatggtgaaaaagctaaaaatcacctttgggtggcagacggtctgaacttcatc
agtaatgccaatgcttctccatactctgcaggtttcattaaattaaaagatcacgaccag
cgtggcgaagtaactgatcctgatcaaattgcagcagcattgacagggaaagtttcgcag
gtaaaagatgccagcgcattcttcttcaacttccctaccgttcagggatttggtaacgtt
tccggttttgaatttatgcttcaggataaaaccaacggttctttggaaaatttagggaca
acaacacaagccttcatcggagagttgatgaaacgtccggaaattgcttttgctttcaca
acctatgcagccggaaacccacaattcacgatcgaggttgatagtgataaagccaatcag
cttggagtttccatcacagaattaatgcagacgatgcagatttactatggaagtagcttc
gtttcagatttcaacagattcggaaaatactacagggtaatggctcaggcggatattcct
tacagaacagatgccaattctttggaaggaatttatgttaaaaataaatcaggcgaaatg
gttcctgtgaaaacactggtgactttaaaaagagctttcggccctgaaacggtgacaaga
aacaacttattcaacgcagtgaccatcaacggaacaccaaaacctggttacagtaccgga
gacgccatcaaagcagtggaagaagtggcagaaaaatctcttccgagaggatttggatac
gaatggacagggattacccgtgaggaaattaaaacaagcggacagacagcgtttatcttt
atgttaagtattttatttgtatacttcctgttggctgctcagtatgaaagttatattctt
cctttcgcagttattttaacgattccaacagggatttttggagtatttgctttcacagga
ttggcaggaattgataataacatttacgttcaggttggtttgatcatgctcgtcggatta
ttagcgaaaaatgcaatcctgattgtagagttcgctgtacaacgaagaaatgcaggaaga
tccttactggaatccgcattacaagcgtcaagattgcgtttaagaccgatcttaatgacc
tcattcgcattcattgtcggaatgttgccgcttgtatttacgcagggagcttctgcaaaa
ggaaatcactcaatcggcttcagtaccgttggcggaatgttgacaggcgttgtattcggg
attttcattattcctgtgatgtttgtgatcttccagtatttacatgaaaaaatgccaagc
agaaaaaagaaaagacttcaaagacaaaaactggaagctgaacttttagctacaactcat
taa
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