Catalinimonas niigatensis: PZB72_12420
Help
Entry
PZB72_12420 CDS
T10977
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cnq Catalinimonas niigatensis
Pathway
cnq00300
Lysine biosynthesis
cnq00550
Peptidoglycan biosynthesis
cnq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PZB72_12420
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PZB72_12420
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cnq01011
]
PZB72_12420
Enzymes [BR:
cnq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PZB72_12420
Peptidoglycan biosynthesis and degradation proteins [BR:
cnq01011
]
Precursor biosynthesis
Amino acid ligase
PZB72_12420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WPP53178
LinkDB
All DBs
Position
complement(3005064..3006548)
Genome browser
AA seq
494 aa
AA seq
DB search
MAILKDILYKVSLRSTVGDTSIEVSSIAFDSRKVEKGSVFVAVSGTQVDGHQYIRKAIEQ
GALAVVCEEMPEEMSEAITFVEVEKSAEALGIMASNFYGNPSSKMKVVGITGTNGKTTVV
TLLQQLFIRLGYNTGLLSTVNNKINDKIIPATHTTPDAVQLNALMAQMVKEGCTHCFMES
SSHAIDQRRIAGIKYTGAVFSNITHDHLDYHKTFENYINAKKRLFDELSTDAFALVNVDD
KRGLIMLQNTKASKNTFSLKSASDFKGKVLSNSLHGLEMEIGGKDIPSQHVWFKLIGDFN
AYNLLAAYGVGILLGETPEDVLTQLSDVKPARGRFEQVISPTGIMAIVDYAHTPDALENV
LKTIQNVRTKNEQVICVVGCGGDRDKTKRPEMAAIAARYSDKVILTSDNPRSEDPEQIIE
DMRAGVSPANYKKVLSITNRKEAIRTACMMSQELDIVLVAGKGHETYQEIKGVKHDFDDF
QVIEEVFNQMQKGT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgatactgaaagatatattatacaaagtttcccttcgctcaactgtaggcgatacc
tctattgaagtgtcttccattgcgtttgactcccgcaaagtagagaaaggaagtgttttt
gtggcagtaagtgggactcaggtagatgggcatcagtatatcagaaaggctattgagcaa
ggggcgctggctgtggtttgtgaagagatgccggaggagatgtctgaagcaataactttt
gtagaggtagaaaagagtgcagaggcattggggattatggcttccaacttttatggtaat
ccatcctccaaaatgaaggtggtaggtattaccggcactaatggaaaaactactgtggtt
acgctgttgcagcaactatttatcagactgggttacaatacgggtttactctctacggtc
aacaataaaatcaatgacaaaattattccggctacccacaccacacccgatgcagtacaa
ctgaatgcactgatggcacagatggtaaaagaaggttgtacacactgctttatggagtcc
agttctcatgccatagatcagcgcaggattgcgggaatcaaatataccggagcagtattc
agcaacatcacccatgaccatctggattaccataaaacttttgagaattacatcaatgcc
aagaaaaggctttttgatgagctaagtacggatgcctttgcgctggtgaatgtcgatgat
aaaagagggctgatcatgctgcagaataccaaagccagcaaaaacacattctctctcaag
agtgccagtgattttaaagggaaagttttgtcaaattcactgcatggtttggagatggaa
attgggggaaaagatataccttcgcagcacgtttggttcaaactcattggcgacttcaac
gcctacaatctgttggctgcctacggggtggggatattactgggagaaactcctgaagat
gtactgacacaactttctgatgtgaaacctgcccggggtcgctttgagcaggtgatttcg
cccactggtattatggctattgtagattatgcgcatacgcccgatgcattagagaatgta
ctgaagactattcagaatgtgcgtaccaaaaacgagcaggtgatttgtgtggtaggatgt
ggaggagatcgggacaaaaccaagcggcctgagatggctgccattgcagcacgctatagc
gataaggtaattcttacttctgacaatcccagaagtgaagatcctgagcagattattgaa
gatatgcgtgccggggtaagtccggcaaactataaaaaagtattgtccataaccaatcgc
aaagaagccatcaggacagcctgcatgatgtcacaggaactggacattgtactggtagca
ggcaaaggacacgagacttatcaggaaataaaaggagtaaaacatgactttgatgatttt
caggtcatagaggaagtatttaatcaaatgcaaaagggcacatag
DBGET
integrated database retrieval system
