Catalinimonas niigatensis: PZB72_22175
Help
Entry
PZB72_22175 CDS
T10977
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cnq Catalinimonas niigatensis
Pathway
cnq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PZB72_22175 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnq03400
]
PZB72_22175 (nth)
Enzymes [BR:
cnq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PZB72_22175 (nth)
DNA repair and recombination proteins [BR:
cnq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PZB72_22175 (nth)
Prokaryotic type
PZB72_22175 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
WPP49381
LinkDB
All DBs
Position
complement(5372562..5373206)
Genome browser
AA seq
214 aa
AA seq
DB search
MTRKERFQAFIHYFAETKPEPQTELSYRNPYELLVAVILSAQCTDKRVNMVTPFLFEAYP
NPKLLSQATFDELFPYIKSISYPNNKTKHLIGMSKMLVEQFNSEVPGTVEELQKLPGVGR
KTANVISSVIFNQPAMAVDTHVFRVSKRLGLVNQTAKTPLEVEKQLVRHIPDEFIGKAHH
WLILHGRYVCLARSPQCHKCELIHFCRYFQKYLS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggaaagagcggtttcaggcatttattcattattttgctgaaacaaaacctgaa
cctcaaacagaattaagctaccgtaacccttatgagttactggtagctgttattttgagt
gcacaatgtacagacaagcgcgtcaatatggtgacgccttttctttttgaggcctaccct
aatcccaaacttctttctcaggctacttttgacgagcttttcccctatatcaaaagtata
tcctatcccaataataaaaccaagcatctcattggtatgtctaaaatgctggtagaacaa
tttaactctgaagtacccggtacggttgaagagttacaaaagcttcctggtgtcggaagg
aaaacagccaatgtcatttcttcagtcatattcaaccagcctgctatggcagtagatacg
catgtgttcagggtatccaaaagattgggacttgtcaaccagactgccaaaactcctttg
gaagtagaaaagcagttggtccgccatattcctgatgaatttatcggcaaagcgcaccat
tggcttatccttcatggacgctatgtatgtctcgcccgtagcccccaatgccataagtgc
gaactcatccacttttgccgctactttcaaaaatatttgtcttaa
DBGET
integrated database retrieval system
