Contarinia nasturtii (swede midge): 116338408
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Entry
116338408 CDS
T08003
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116338408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116338408
04121 Ubiquitin system [BR:
cns04121
]
116338408
Membrane trafficking [BR:
cns04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
116338408
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116338408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
WDR55
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
F-box-like
Beta-prop_EML
Beta-prop_EML_2
F-box
ANAPC4_WD40
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
CFAP251_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Vts1
Beta-prop_IP5PC_F
HET-s_218-289
Motif
Other DBs
NCBI-GeneID:
116338408
NCBI-ProteinID:
XP_031619480
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MADKCTEFSKKQQEPKINDGEHKSSVTADSTASTEVKTAINVDDKNAHNAKSMLSSVGAA
EIESANVAHTTRTTAHTPSNDSTLTKTTTTTTIRANTPNHDIINSKTTSTSEEIKTSPTS
SQAPVVVDIVMTGNELMEMKESTTTAAGMQTTATTPIHKGIESDYLNENENEADEISENS
DNFLYEARANAEKVMYLNLETPVLDDNNEFMEVDQRQCHGAEQSQPHYCKRGFRKSDNTA
NFTVTKPKRLSDEFDSRDNDISNNKETLPVVNTIGEKVSQSDLMIGEGSPEDNSNNVNES
DLVKMNRSSDIIDDDTSTSSLINIANKQPPIQEHMEDSSSPHSSMSPADVAIADQKQQIE
HLSDVVEELTNHGDEHQQRSEHFFANSQRLFTNSNQLYTNNDVQSMDAIERRDFINEQEA
TANCILSSSSLIINGTNGDEPRLNLDLLGNSFSQKMEQIAALTEEQTTKHADNVTSTENG
AQNAININSNDQLITTPTTSRTKRSRLPSHHAEKITLPRSIEKINDSGKESTSTATATSS
HREASDINSTAMPTDASNQSNACNCTTDTIDDEQQSTSKSTCSNCNKEPANESRLEDASN
ADLDDDEDLDDDTAGDHEDAEENGESSSTSRANSSRVRCSGNSSCTSNCKNKHSNSDNTR
QDAAASADLPPNVSPSYYREAGIALEDQELKEYENETIDKNFRLMMGLEPENPYADWSCE
VNSDGEEVCTCRDYADNETTVNSEDELPSRDVDLSLYSISGVVLNSNGNSSTDTPTSRNH
RKRKLTENRSSIFSDTTSGCSDANSNDRKRLALDESGVSQKLNSSTSGSQPSTPTSSSTN
ISLRTPRSVIPTRDNPPPELSDWLNQFKQWSHVERLVAVDRLIEHCEPTQVRHMMKVIEP
QFQRDFISLLPGELALQVLSYLTPKDLLRAAQTCKSWRALCDDNLLWKVKCKQLNISIET
SKDRPKRGRIGNMPPISSPWKAAYIRQHIIEMNWRSRPIREPKVLKGHDDHVITCLQFCG
NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMSANIIISGSTDRTLKVWNADNG
YCIHTLTGHTSTVRCMHLHEKKVVSGSRDATLRVWDIVQGKCLHTLVGHLAAVRCVQYDG
KLVVSGAYDYMVKVWNPETEECLHTLQGHTNRVYSLQFDGVHVVSGSLDTSIRVWDAITG
TCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDTTNGQCLQTLSGPNKHQSAVTCLQ
FNSRFVITSSDDGTVKLWDVRTGEFIRNLVTLESGGSGGVVWRIRSNDTKLICAVGSRNG
TEETKLMVLDFDVEGACLKCS
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagtgtacagaattttcgaaaaagcaacaagaaccaaaaataaatgatggt
gaacataaatcaagtgttactgctgattcgactgcgtctaccgaagtcaaaactgccata
aatgtagatgataaaaatgcacataatgcaaaatcaatgttaagtagtgtaggagcagct
gaaattgaatcagcaaacgtagcgcatacaacaagaacaactgcacacacaccatccaat
gattcaacattaacgaaaacaacaacaacaacaaccataagagcaaacacgccaaaccat
gatatcatcaattcgaaaacgacgagtacttctgaagaaatcaaaacatctccaacatcc
tcgcaagcacccgtggtcgttgatattgtaatgactggaaacgaattaatggaaatgaaa
gaatcaacaacaacagcagccggtatgcaaacgacagcgacgactccaattcataaaggc
attgaaagtgattacttaaatgaaaatgagaatgaagccgacgaaatatcagaaaacagt
gataattttctgtacgaggcccgtgcaaatgcggaaaaagttatgtatttaaatttagaa
acacctgttcttgatgataataatgaatttatggaagtcgatcaacgccaatgccacggt
gcagaacaatcacagccgcactattgcaaacgtggtttccgcaagtctgataatacagcc
aatttcacggtaaccaaacctaaacgtctaagtgatgaattcgattcgcgcgacaatgat
attagcaataataaagaaacgctgcctgttgtgaatacgatcggtgaaaaagtgtcccaa
tctgatttgatgatcggcgagggttcaccagaagacaatagcaacaatgtaaatgaaagc
gatttagtaaagatgaatcgttcgtcggatattattgatgacgatacatcaactagtagt
ttgataaatattgcaaataaacagccgccaatccaagagcatatggaagattcctcatcg
ccacactcgtccatgtcaccggctgacgttgccattgctgatcaaaaacagcaaatagaa
catttgtcggatgttgtcgaagaattgacaaaccatggcgatgagcatcagcaacgatcg
gagcattttttcgcaaattcgcagcgcttattcacaaactcgaaccaattgtatacaaat
aatgatgtgcaatcaatggatgctattgaacgaagagattttatcaacgaacaagaagcg
acggccaattgtatattgagcagtagttcgttgattatcaatggaaccaatggagatgaa
ccgagactgaatttagatttgttagggaatagtttttcacaaaaaatggaacaaatagcc
gctttgactgaagagcaaactaccaaacacgccgataatgtgacttcgactgaaaatggc
gcccaaaatgcaattaatattaatagcaatgatcaattgattacaacacccaccacaagt
agaacaaagcgatctcgactgccatcacatcacgccgaaaaaatcacattaccaaggagc
atcgaaaaaataaacgattccggtaaggaatcaacgtcaacggcaacagcaacatcatca
catcgcgaagcatccgatataaactcaaccgccatgccaacagatgcttcgaatcaatcg
aacgcatgcaattgtacaacggatacgattgacgatgaacaacaatccacctcgaaatca
acatgttcgaattgcaataaagagccagccaacgaatcacgtttggaagatgcatcgaat
gctgacctcgacgatgatgaggatttagacgatgatactgccggcgatcatgaagatgcc
gaagaaaacggcgaatcatcatcaacgtcacgagctaattcaagtcgtgttcgatgtagt
gggaatagttcatgtactagcaactgtaaaaacaaacattcgaattccgataatacaaga
caagatgcagccgcatccgcagatcttccaccaaatgtttcaccatcatactaccgagaa
gccggaattgcacttgaagatcaagagttaaaagagtatgaaaatgagacgatagataaa
aatttccgattgatgatgggactagaaccggaaaatccgtatgccgattggtcgtgtgaa
gtgaattcggatggtgaagaagtgtgcacgtgccgtgattatgccgataacgaaacgact
gtaaacagtgaagatgaattaccaagtcgagatgtggatttgtctttatattcaatttct
ggtgttgtgctaaatagcaatggtaactcatcaaccgatacaccaacatctcgaaatcat
cgaaagcgaaaactaaccgaaaatcgatcgtcaatatttagtgacacaactagtggttgc
agtgatgcaaatagcaatgatagaaaacgtcttgcgctcgatgaatcaggcgtatcacaa
aagttaaattcaagcacgagcggtagtcaaccaagtactccaactagttcatcaacaaat
attagcttacgaacaccacgttcagtgattccaacgcgagacaatccgccgcccgaattg
tctgattggttaaatcaattcaagcaatggtcacatgttgagcgcttagtcgccgtcgat
cggttgattgagcattgtgaacccacccaagtgcgacacatgatgaaagtaattgaacca
caatttcaacgtgatttcatatcgctattgcctggcgagcttgcacttcaagttctatcc
tatttaacaccaaaagatcttcttcgggcagcgcaaacgtgtaaaagttggcgtgctcta
tgtgatgacaatttattatggaaagtaaaatgtaaacaattaaatatttcgattgaaacg
tcaaaagatcgtccgaaacgtggtcgtattggtaatatgccaccaatatcatcgccatgg
aaagcagcttatattcgacaacatatcattgaaatgaattggcgttcacggccaattcgt
gagccaaaagttctcaaaggtcatgacgatcatgttataacttgtcttcaattttgcggt
aatcgcatcgtttccggctcggatgataatacgcttaaagtttggtcagccgtcactggt
aaatgtttacgcacattagttggacacaccggtggcgtttggtcatcacaaatgtcagct
aatatcataatttcgggtagcacagatcgaacattgaaagtttggaacgctgacaatggc
tattgtattcatacactaactggacacacgtctaccgttcgttgtatgcatttacacgag
aaaaaggttgtaagcggatcacgagatgcgacgcttcgtgtttgggatatagtacaaggc
aaatgtttgcatacgcttgttggccatttggcagctgttcgttgtgtacaatatgatgga
aagcttgtggtttccggtgcttatgattatatggttaaggtttggaatccagaaacagaa
gaatgtttgcatacattacaaggccacacaaatcgtgtttactcacttcagtttgacggc
gttcacgttgtatctggttcgttggatacatcgattcgcgtttgggatgcaattacagga
acctgcaaacacaccttaatgggtcatcaaagtcttacatctggcatggaattgcgacaa
aacatattggtgtcgggaaatgctgattccacagtcaaagtttgggatacgaccaatggc
caatgcttacaaacactatcgggtccaaataaacatcaatcggctgttacgtgtttgcaa
tttaattctcgattcgtaattacgtcatccgatgatggaacggttaaattatgggacgtt
cgtactggtgaattcattcgtaacttagtcacattagaatcgggcggctcaggcggtgtc
gtttggagaatacgatcaaatgacaccaaattaatatgcgctgttggatcccgtaatggc
accgaagagaccaagctgatggtattggactttgatgttgaaggtgcctgcttgaaatgc
tcataa
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integrated database retrieval system
