Contarinia nasturtii (swede midge): 116339100
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Entry
116339100 CDS
T08003
Name
(RefSeq) fringe glycosyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00514
Other types of O-glycan biosynthesis
cns04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116339100
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116339100
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cns01003
]
116339100
Enzymes [BR:
cns01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116339100
Glycosyltransferases [BR:
cns01003
]
Glycan extension
O-Glycan
116339100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
PAP2
Motif
Other DBs
NCBI-GeneID:
116339100
NCBI-ProteinID:
XP_031620624
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MKCLHKDVIRASGVGVLTIFRRIKRLLQMMALIMIVAFMTSVLYQNVHGLKDLESYHLPL
TEPSKTTNHPMNIGLKNHAINEVADIISNPSRPQVNTAKAKNNDRPKDIFVTDYLLKQRH
IHEFSVTATPKPTTTNLNDIFITVKTTKLYHDTRLALIIKTWFQLAKDQTWFFTDTDNQF
FQHKTSGHLINTNCSMGHLRKALCCKMSVEFDTFLESGKKWFCHFDDDNYVNIPKLVELL
SNYSPTLDWYLGKPSIASPLEIYVDNNDDKQPHKKISFVFATGGAGFCISRTLALKMLPI
AGFGKFMSIGDRIGLPDDVTMGYIIEHLLKVPLTVIETFHSHLEPMDILPKETFKEQVTF
SYGHIKNNTNVLLIDGFDDKIDPTRLLSLHCHLYPNILNGKLCSPQALQMN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttacacaaagatgtgattagagctagtggtgttggtgtattaacaattttc
cgacgaattaaacgacttttacaaatgatggcattgattatgatagttgcatttatgact
tcggtcttgtatcagaatgtgcatggtttaaaagatttggagtcttatcatttaccactg
acggagccatcgaaaaccaccaatcatccaatgaacattggtcttaaaaaccatgcgatc
aacgaagtggccgatatcatatcaaacccatccaggccacaagtgaacacagcaaaggcc
aaaaataatgaccggccaaaagacattttcgtcaccgattacctcttaaaacagcgacac
attcacgaatttagtgttacagccacaccaaaaccaacaacaaccaatctcaatgatata
ttcatcacggtgaaaacaaccaaattataccatgacacaagattagcgcttataatcaaa
acgtggtttcaattggcaaaagatcaaacatggtttttcaccgacaccgacaaccagttc
tttcaacacaaaacaagcggtcatttaatcaacacaaactgctccatgggacatctaaga
aaggcattgtgctgtaaaatgtccgttgaattcgacacctttctcgaaagcggaaagaaa
tggttctgtcactttgatgacgacaattatgtgaatataccaaaattagttgaactgctt
agcaactacagcccaacattggattggtatttgggaaaaccgagtatagcatcgccactt
gaaatctatgtagataataatgacgataagcaaccgcataagaaaatttcatttgtgttt
gcaacaggtggtgccggtttttgcataagtcgaacgctggcattgaaaatgctaccgatt
gctggttttggtaaattcatgtcgattggtgatcgtattggattgcctgacgatgtaaca
atgggctatatcatcgaacacctattgaaagtgccattgactgtgatcgaaacgtttcat
tcacacttggaaccaatggacattcttcccaaagaaacgttcaaagaacaggtcacattt
agctacggtcacataaagaataatacaaacgttttacttattgatggattcgatgataaa
atcgatccaacacgattattatcacttcattgtcatttatatccaaatattttgaatggc
aaactctgttcaccgcaagcactacaaatgaactga
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