Contarinia nasturtii (swede midge): 116339908
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Entry
116339908 CDS
T08003
Name
(RefSeq) polyhomeotic-proximal chromatin protein-like isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116339908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116339908
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
116339908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
116339908
NCBI-ProteinID:
XP_031621866
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MEQRRNGRFYTKRSAHYNNLQKQEEEEKLKNSGANNNNNSTNSNNNTSNLGPLKDNSNIK
PRKSLESVSQSPSNSTTTPNPIVKSNSSERPKVGGGDIQIKPNTPTTSKSANRKIVPSLN
NQNLIPKLPIASILNERPLKCLETLAQKAGVTISETTIHHHHTKMDKGQVSNSTQQLSTL
QLSAEQLQQLHQFQLQQAFAPTIQVKQEFPQNQGNSIQEQLNKHIQEQNQAAAAAQVQQM
QLIDTASSQHQTQNNGTMGIKYVNGEHQQQTSTTMTTMPPLQLQNGQLPAEWNRSVQVVQ
QPIQNPAYLQTIYGQQVLMPNLIQQSFNQQPQIQVIAAGKPLQGGQITPQMIATAQGKSV
LGNSQAFSSAYTLPTGNQSQTLFQVFTNPQQLQQQQQQQQQQQQQQQQQQQQQNILPMTT
ATSQNNGTIAAKNQQTEMKNFNQQQKVVQKSNTVNSGGQTQITAAQANTQQNQQCVQISP
TTAQIINQIQQPGGQQMQFAAPWLQSTSFPQWITATNGLPPQFQNQIFIRPDGTQGMLIP
QTQTIQAQAAPSQQNQQQQVQAQAPQAQIQTTTQQNAQSQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQAQQNAVQQTINQQTNIQSTPNKRLVTDNLTPKQQTPTRTPTLLPQGANQTI
RPNQASSVSTQTSANQNQVIVGQKNAKLRTKPPNVRPAVTNLKTDAGNQTKLLPGNQTLH
QIVTSAGSKVVVMNNNGTQMISTMNMPKQQQTAFLQQQPNQIQVIPQQMQLQSLQLAGQA
QAQFVNQQEQQQIQNQIMQSQQQMALQQAQNSLNTSQANGISQITIQQPKQILVGQQSVA
QSQGTLDNRPIMTMVSIGGNTSSPLNAMQNLSSPIGQQQSITLQPPPNPLAAMTSLSYSA
ATSGILSNSTANISKDEKITSKTDETQKTSVAESNATYSMANSTITTGSGTITITSSSAS
ITTPKVKTTDSIKTTITIPASKPSPKRVENSKAEESNKSRSATPKLTISMSKTSPKKVES
PKPAESPKPSEKQSANSLSTTTTSSTQNVQTSANEDKSATMNGNSTNNTQPPTIPATLNL
LKNDKGLLPKAMIKPNVLTHVIAGHVIQEGTEPFPVTRQRYSDDSDEPPSKRRNTSSPDK
PAAGTPDRSTCVQCGKKDSKGKLKHKQYCSKTCSKAAKAGAIPTSQQNGDHKQLRIRNEN
GTTNGSVSPKSLPSPTSSSASTNGTTSDTSSMGSTDANGNGKKPCESTPMEISNDADDQD
EPISFLVKWSVEEVCDYIRSLAGYSDYAEDFANHEIDGQALVLLNENHLVNTMKIKLGPA
LKIMSQIDAIKKNGAPQTEQQQQQ
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacgcagaaatggtcgtttttatacaaaaagatcggctcactacaataatctt
caaaagcaagaggaagaggaaaaactgaaaaattccggtgctaataataataacaacagc
acaaacagcaataataatacttcgaatttgggcccgttgaaggacaattcgaacataaaa
ccgcgtaaatcattggaaagtgtgagtcaatcgccgagtaattcgacaacaacgccaaat
ccaatagttaaatcgaattcatcggaacggccgaaagttggtggtggcgatattcaaatt
aaaccaaatacgccgaccacatcaaaaagtgctaatcgaaaaatcgttccatcgttgaac
aatcaaaatttaattcccaaactaccgatcgcttcgattttaaacgaacgaccattaaag
tgcttggaaacattagcacaaaaagctggcgtaactattagcgaaacaacaattcatcat
catcatacgaaaatggataaaggacaagtttcaaattcgacacagcaactgtcaacattg
caactttcagcggaacaattacagcaattacatcaatttcaattgcaacaagcattcgca
ccgaccatccaggtgaaacaagaatttccacaaaatcaaggcaactccatacaagaacaa
ttgaataaacatatacaagagcaaaatcaagccgccgcagcagctcaagtacagcaaatg
caattgattgacacggccagttcacaacatcaaacgcaaaacaatggcacgatgggcatt
aaatatgtcaatggtgaacatcaacaacaaacatcgacaacgatgacaacgatgccaccg
cttcaattgcaaaatgggcaattgccagccgaatggaatcgaagcgttcaagttgttcag
caaccaattcaaaatccagcctatttgcaaacaatttacggccaacaggtgctgatgcca
aatttaattcagcaaagtttcaatcaacagccacaaattcaagtgatcgctgctggaaag
ccattacaaggcggtcaaattacaccgcaaatgatagcgaccgcacaaggaaaatcggtg
ctaggcaattcgcaagcattcagctcagcatatacattgccaaccggcaatcaatcgcaa
acattattccaagtattcacaaatccacaacagctacaacaacaacagcagcagcagcaa
cagcaacaacaacagcaacaacaacagcagcaacaacaaaacattttaccaatgacaact
gcaacgtcacaaaacaatggcacgattgccgctaaaaatcaacaaactgaaatgaagaat
tttaaccaacaacagaaggtcgttcaaaagtcaaacaccgttaattcaggtggccaaaca
caaatcacagcagcacaggcaaatacacaacaaaatcagcaatgtgttcaaatatcacca
acaacggcacaaattataaatcaaattcaacagccaggcggacaacaaatgcaattcgct
gcaccgtggcttcaaagtacatcattcccgcaatggattaccgcaacaaatggcttgcca
ccacaattccaaaatcaaattttcattcggccagatggaacacaaggcatgcttattcca
caaacacaaacaattcaagctcaagcggctccgtcacaacaaaatcaacaacagcaagtt
caagcacaagcaccacaagcacaaattcaaactactactcaacaaaatgctcaaagtcaa
caacaacaacagcagcagcagcagcaacaacaacaacaacaacaacaacaacagcaacaa
cagcaacagcagcagcaacaacaacaagcgcaacaaaatgcggtgcaacagactattaat
caacaaacaaatattcagtccaccccaaacaaacgattggtaaccgataatctaacgccg
aaacagcaaacaccaacgcgtacaccaacactactgccgcaaggtgcaaatcaaacaatt
cgcccgaatcaggcgagttccgtgtcgacccaaacatcggccaatcaaaatcaagtgatc
gttggacaaaagaatgcaaaactacgtacaaagccaccgaatgttcgaccggctgtaacc
aatctcaaaaccgatgctggaaatcaaacaaaattactacccggcaatcaaacgttgcac
caaattgtaacatcagctggcagtaaagtggtggtcatgaacaataatggaacacaaatg
atatcgacaatgaatatgccaaaacaacaacaaactgcatttttgcagcagcagccgaat
caaatccaagtgataccacagcaaatgcaattgcaatcacttcaattggctggacaggca
caagcccaatttgtgaatcaacaggagcaacaacaaattcaaaatcaaatcatgcaatcg
caacagcaaatggcattgcaacaagctcaaaacagtttgaatacaagccaagcaaatggc
atttcacaaattacaattcaacagccgaaacagattctggtcggtcaacagagtgtggct
caaagtcagggaacacttgataatcgtccaattatgacaatggtatcgatcggcggcaac
acatcatcaccgttgaatgcaatgcaaaatctcagcagtccaattggacaacaacaaagt
ataacacttcagccaccaccaaatccattggctgccatgacatcgctatcatacagtgct
gcaacgtccggtattctttccaatagcactgcaaatatttcaaaagatgaaaaaatcaca
tcaaaaactgacgaaacacagaaaacaagtgttgcagaatcgaatgcgacctattcaatg
gccaattcaactataaccactggatccggaacaatcacaatcacatcctcatcagcatca
ataactacaccgaaagttaaaacaaccgattcaatcaaaaccacaataacaattccggcg
agtaagccaagccccaaaagggtggaaaattcaaaagccgaagaatcaaataaatcacgt
tcagcaactccaaagctaacgatttcaatgagtaaaaccagtccgaaaaaagttgaaagt
ccaaaaccagcagagtcgccaaaaccaagtgaaaaacaatcggccaattcattgtcaaca
acaacaacatcatcaacacaaaatgttcaaacgtcagccaatgaagataaatcagcaaca
atgaatggaaattcaacgaacaatacacagccaccaacaattccagctacattgaatctc
ctcaaaaatgataaaggtttgttgccaaaagcaatgatcaaaccaaatgttttaactcat
gtcattgccggtcatgttattcaagagggaaccgaaccattcccagttacacgacaacga
tactcagacgattccgatgaaccgccatcaaaacgtcgcaacacatcgtcaccggacaaa
ccggctgcaggcacgccagatcgttcgacttgtgtacaatgtggcaaaaaagatagcaaa
ggaaaacttaagcataaacagtactgttcgaaaacctgttcaaaggcggccaaggctggt
gcaataccaacatcacaacaaaatggtgaccacaaacaattgcgcattcgtaatgaaaat
ggcacaacaaatggttcggtatcgccaaaatcattgccgtcgccaacttcatcgtcggct
tcaacgaatggcaccacaagcgacaccagctcaatgggatcgaccgatgcaaatggcaac
ggtaaaaaaccatgcgaatcaacgcctatggaaatttcaaacgatgccgatgatcaagat
gaaccgatttcatttttggttaaatggtccgtggaagaggtatgcgattatattcgcagt
ttggctggttacagtgattatgctgaagattttgccaaccatgaaattgacgggcaagca
cttgtattgctcaatgaaaatcatttggtgaatacgatgaaaattaaattgggaccggct
ttgaaaattatgtcacaaattgatgcgatcaagaaaaatggcgccccacaaaccgaacaa
caacaacaacagtga
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