Contarinia nasturtii (swede midge): 116340964
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Entry
116340964 CDS
T08003
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116340964
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cns01007
]
116340964
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116340964
Enzymes [BR:
cns01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
116340964
Amino acid related enzymes [BR:
cns01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116340964
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116340964
Prokaryotic type
Other AARSs
116340964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
Ubiquitin_IARS1
tRNA-synt_1e
DUF2492
MGTA_C
Motif
Other DBs
NCBI-GeneID:
116340964
NCBI-ProteinID:
XP_031623609
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MAPSPVEANVQSGVPKLSAENGSSDGDLYRVPETINFPAEEEETLKFWGDNKVFEKCLEQ
SKGKPNYTFYDGPPFATGLPHYGHILAGTIKDVVTRYAHQQGYHVERRFGWDCHGLPVEY
EIDKTLNIRGPEDVAKMGIAAYNNECRKIVMRYANEWEQIVNRMGRWIDFRKDYKTLYPW
FMESIWWVFHQLFAKGLVYQGVKVMPYSTACTTALSNFESGQNYKDVVDPFVVVGFPLLS
PKFKDVQMLAWTTTPWTLPSNLSLCVNPEMVYLHIKIKDTGAQYIFSESRVGTVFSDDKL
YDIVAKLNGKQLKDEKYEPLFDYFVEYSKKMNAHRVLCDGYVTEDSGTGVVHQAPYFGED
DYRVCLINGIIQKDSEIICPVDESGRFVDPVSHFKGQYVKDADKNIIAHLKASGRLIQNG
QVKHSYPYCWRSDTPLIYKAVPSWFIRVEQMSQQLLKCSSQTYWVPDFVKEKRFGNWLRE
ARDWAVSRNRYWGTPIPIWMSADGEEIVCIGSIAELQQYSKTPITDLHRESIDDIVIPSK
RPGQPPLRRITQVFDCWFESGSMPFAQQHFPFENEQEFKNCFPADFIAEGIDQTRGWFYT
LLVISTALFNTAPFKNLIANGLVLAADGQKMSKRKKNYPDPMEVVHKYGADALRLYLINS
PVVRAENLRFKEEGVRDIIKDVFLPWFNAYRFLFQNIYRYVKDEPTANNQFQFDATVVAG
ATNIMDVWIRSFKESLLDFTAREMKAYRLYTVVPRLTKFIDQLTNWYVRLNRRRIKGEEG
VKDCVASLNILFDVLDTMVKMMAPFTPYLSEYMYQRLSRLNTSSNLSSKPPASPAVAKGK
KNSGAATSSTFSGSVHLEMMPKANRAYIQTTVETAVNRMQNVIELGRVLRDRKTMPIKYP
VPSVIVIHKNEQYLKDVQALEPFILGELNARQLVTCADKGVYGVKLRAEPDHKTLGLRLK
GDFKNVMAEIKKLTDDQIQAALDQGYFQVLQHRVELEEIRIIYALDEKTDSKFEAHSDND
VLVLMDLTPTEELLFEGVAREIINRIQKLKKKVQLIPTDPVIVYYEISDTNSDLSKVAKT
HQEFIEGVIKSPFLPLDAAKIAKEASTRSFIDEECDVKGVTFKITISMEKKAANAAAAAK
TSTSPATKPVARWLNVVTKIQPRYCSSGASNLGTVLIDDPHKKPLTLQKLQREIEQLFGL
YHMNLFYTCNGKPVDLSSPIDTAEKFNGETLFVSNQPGYVESDKKLLTTAKVPFVKFSNV
TVDGLPRTILLENPKGELL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaagcccggttgaagcgaatgtgcaaagtggtgttccgaaattgagtgcagaa
aatggttcatccgatggagatttgtatcgtgttccagagacaattaattttcctgcagaa
gaagaggaaacattaaaattttggggcgacaataaggtgtttgaaaaatgccttgagcaa
tcgaaaggaaaaccaaactatactttctacgatgggccaccatttgcaactggattgcca
cattatggtcatattttagctggtacaattaaagatgttgttacacggtatgcacatcaa
caaggctatcacgttgaacgacgattcggttgggattgtcacggtttacccgttgaatat
gagatcgataaaacgctcaacattcgtggaccagaagacgttgccaaaatgggaattgcg
gcatacaacaatgaatgccgaaaaattgtcatgcgttatgctaacgaatgggagcaaatt
gtaaatcgaatgggtcgatggattgatttccgtaaggactacaaaacgttgtatccatgg
tttatggaatcaatttggtgggttttccatcaattgtttgccaaaggtttggtttatcaa
ggtgtaaaggtgatgccttattcaactgcctgtactaccgctttgtcgaatttcgaatcg
ggtcaaaactacaaagatgttgttgatccattcgttgttgttggattcccgcttctttca
ccgaaattcaaagacgttcaaatgcttgcatggacaacaacaccatggacattgccatcg
aatttatcgctttgtgtgaatccggaaatggtttaccttcacatcaaaataaaggacacc
ggtgcccaatacatcttctccgaatcacgagttggcactgtattcagtgatgacaaatta
tacgatattgtagcgaaattgaatggcaaacaattgaaagacgaaaaatacgaaccgtta
tttgattattttgtcgagtattcgaaaaaaatgaatgcacatcgtgtattatgcgatgga
tatgttacagaagattctggtactggagttgttcatcaagcaccatactttggagaggac
gattatcgtgtgtgcttaataaatggtatcatacaaaaagatagtgagattatttgtccg
gtcgatgaatcgggccgatttgttgatccagtttcacatttcaaagggcaatacgttaaa
gatgccgacaaaaatatcattgcacatttaaaagcaagcggtcgtttgattcaaaacggt
caagttaagcatagttatccatactgttggcgatcagatacaccgcttatctacaaagcc
gtcccatcgtggttcattcgagttgaacaaatgtcacaacaattgctaaagtgctcttca
caaacatactgggtgccggactttgtgaaggagaagagatttggcaactggttgcgtgaa
gcacgagattgggctgtcagcagaaatcgatactggggtactccgattccaatttggatg
tcggccgatggcgaggaaattgtttgcatcggtagcattgcagagctacaacaatacagt
aaaacaccaatcacagatttacatcgtgaatcaattgatgacattgtaattccatcgaag
cgaccaggtcaaccgccattacgtcgtattacacaagtatttgattgttggtttgaatcc
ggttctatgccatttgcgcaacaacattttccattcgaaaatgagcaagaattcaaaaat
tgcttcccagctgatttcattgccgaaggtattgatcagacgagaggatggttctataca
ttgcttgtcatctcaacggctctattcaatacggcaccgtttaaaaatctcattgcaaat
ggtttagttttggcagccgatggccaaaaaatgtccaaacgtaaaaagaactatcccgat
ccaatggaagtagtgcataaatatggtgctgatgctttacgtttgtatcttatcaattca
ccagttgtacgagcagaaaatttacgtttcaaagaggaaggtgttcgcgatataatcaaa
gatgtatttttaccatggttcaatgcatatcgcttcttattccaaaatatttatcgttat
gttaaagacgaaccaactgcaaataatcaatttcaatttgatgcaacggttgtggctggc
gccaccaatattatggacgtatggattcgatcgttcaaagaatcgctattggatttcacc
gcacgcgaaatgaaagcatatcgtttgtacaccgttgtgccacgtctaacgaaattcatt
gaccaacttacaaattggtatgttcgtttgaatcgtagacgtatcaagggcgaagaaggt
gtcaaagattgtgttgcatcgttgaatattcttttcgatgttctggatacaatggtaaaa
atgatggcaccattcacgccttacctttcagaatacatgtatcaacgtttgtcacgtttg
aatacatccagcaatttgtcgtcaaaaccaccagcatcaccggctgtggcaaagggaaaa
aagaattcaggagctgccacatcatcgacattcagtggcagtgttcacttggaaatgatg
ccgaaagcaaatcgcgcatatattcaaacaaccgttgaaacggctgtaaatcgtatgcaa
aatgtcattgaattgggtcgagttttgcgtgatcgcaaaacaatgccaattaaatatccc
gtaccaagtgttattgtcatccataaaaatgagcaataccttaaagatgttcaagcactc
gaaccatttattttgggcgaattgaatgcacgtcagttggtcacatgcgctgacaaaggt
gtatatggcgttaaattacgcgctgaacccgatcacaaaactttgggcttaagattgaaa
ggtgatttcaaaaacgttatggctgaaattaaaaaactaaccgacgatcagattcaagcg
gctcttgaccagggctattttcaagttttgcaacatcgtgttgaattagaagaaattcgc
atcatttatgcattggatgagaaaacagactcgaaatttgaggcacacagtgacaacgat
gttttggtattgatggatttgacaccgaccgaagaattactattcgaaggtgttgcacgt
gaaatcataaatcgtattcaaaaattgaagaaaaaagtacaattaatcccaaccgatccg
gttattgtatattacgaaatatcggataccaacagtgatttaagtaaagtggccaaaaca
catcaagaatttattgaaggagtcattaaatcaccgtttttgccacttgatgcggcaaaa
atagcaaaagaagcgtcaacacgcagttttattgacgaggaatgcgatgttaagggggtc
acattcaaaataaccattagcatggaaaagaaagcggccaatgctgctgctgctgcgaaa
acttcaacgagtccggcaacaaaacctgtggctcgttggctgaatgtagtcacaaaaatt
caaccccgttattgctcgtccggtgccagtaaccttggcaccgttctcattgatgatccc
cataagaaaccattaactcttcagaaactacagcgcgaaatagagcaattgttcggattg
tatcacatgaatttgttctacacatgcaatggaaagccggttgatttatcgtcacccatt
gacacagccgaaaaattcaacggcgaaactttgttcgtgtccaaccaacccggatacgtg
gaaagcgataagaaactattaaccacagctaaagtaccgtttgtaaaattttccaacgta
acggttgacggattgccaagaacgattttactggagaatccaaagggtgaacttttataa
DBGET
integrated database retrieval system
