Contarinia nasturtii (swede midge): 116345456
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Entry
116345456 CDS
T08003
Name
(RefSeq) GTP-binding nuclear protein Ran
KO
K07936
GTP-binding nuclear protein Ran
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
cns03013
Nucleocytoplasmic transport
cns03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116345456
03008 Ribosome biogenesis in eukaryotes
116345456
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116345456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116345456
03009 Ribosome biogenesis [BR:
cns03009
]
116345456
03016 Transfer RNA biogenesis [BR:
cns03016
]
116345456
03036 Chromosome and associated proteins [BR:
cns03036
]
116345456
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116345456
04031 GTP-binding proteins [BR:
cns04031
]
116345456
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116345456
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116345456
Pre-60S particles
116345456
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116345456
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116345456
Spindle formation proteins
116345456
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116345456
GTP-binding proteins [BR:
cns04031
]
Small (monomeric) G-proteins
Ran Family
Ran
116345456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RNA_helicase
Gtr1_RagA
AAA_24
ArgoMid
AAA_7
AAA_16
DUF5906
DUF5935
Motif
Other DBs
NCBI-GeneID:
116345456
NCBI-ProteinID:
XP_031630717
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MAAEQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKRYVATLGVEVHPLVFHTNRGPIRF
NVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVAMPA
LLPPEVKMDKEWQLQIEKDLQEAQETALPEEDEDL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaacaagatattccaacctttaaatgcgttcttgtcggtgatggtggtact
ggtaaaactacctttgtcaaacgtcacatgactggtgaattcgaaaagcgttacgtcgcc
acactcggtgtggaggtccatccactcgtgtttcacacaaatcgtggtccaatccgcttc
aatgtctgggatactgccggtcaggaaaaattcggcggtcttcgtgatggctactacatt
caaggtcaatgcgccgttattatgtttgatgtaacatctcgtgttacctacaaaaacgta
ccaaattggcatcgggacttggtgcgtgtatgcgaaaatattccaattgttttgtgcggc
aacaaagtcgacatcaaagatcgaaaagtaaaggccaagagcatcgttttccacagaaag
aagaatcttcaatactacgacatttcggccaaatcaaattacaacttcgagaagccattc
ttgtggttggcccgtaaattggtcggtgatccaaatctagaattcgtcgcaatgcctgct
cttttgccgccagaagttaaaatggacaaagaatggcaattgcaaatcgaaaaggatttg
caagaagcacaggaaaccgcattacccgaagaggatgaagacttgtaa
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