Contarinia nasturtii (swede midge): 116352135
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Entry
116352135 CDS
T08003
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116352135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116352135
Membrane trafficking [BR:
cns04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
116352135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
116352135
NCBI-ProteinID:
XP_031640316
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MAMEWITAIDKRPCDRNLRDAELISCRLRRVEPLCRLPGSALQQLAMCGFYEDLEKGITL
FRAGEQGRFWYAVLGGSLEVRYHAPDTENKSPVTLCNLGVGATFGESILHDLPRDSTVVT
KTTCELLRVETKDFRLIWEKNKELMNDIITNCKLKNGFGRGITPAAQTSPVRRANSPDHP
NPALAITEIPSPAIARIGWALRVLLLSDSSSCLKDRKVSGKLIRKCALGTELVDWLMNLS
VIVHTRTQAAGMWQAILEEGVLSHVNKEQPFKDKCFLYRFKVDEDGTGGQPTSDEQNAAN
EHVREALGTLLHRGSDATLRMILRKTSHERTQEELELVFEELLHIAALSHLSTSIKRELA
SIIVFEAHAYAGTILFNQGDEGRSWYIILKGSVDVVIHGKGTVATLKEGDDFGKLALIND
APRAATIVLKENNCHLVRVDKEHFNRILRDVEANTLRLQEHGKDVLVLERVAKQRGFSSA
FKYTVMSGTPQKMLEHLLETRLGGQVGPNDPFLDDFLLTHIVFMPVPILINELAHLFHNG
GNEENDSSATAEDTEYALTMRKRVIQFVQKWVIAVRQAVFEEPITVAFIEELASIVDADP
DLQEEAGIMHHVLTQLLRYQEERQAQTGQKWKLPPNGQPICSFSGSEKQSRTPIRPEDDI
IFRVYCADHTYCTLRFPINATTEMIKASAADKLQLNRANEDLVLAEVKSNGERTIFKDHD
VSIPTALYLNARIFVSSKDHIDALTPLPEQEEITEGIPLELEQLGTKELAFHITQFDWDL
FWSVHEYELLYHTFGRHHFGKITANLDVFIRRFNEIQYWVVTEIASQSSITKRVLLIRKF
IKLAAYCKEYQNLNAFFAVVMGLSNNACSRLTQSWDKVPSKFKKLFMEFEALIDPSRNHR
AYRSFVGKLQPPVIPFMPLLLKDMTFAHEGNKTSLDGLVNFEKMHMMAQTMRTIRFCRSR
HLVLDPPSPKSEGDIRAYVGCFRVIENQRQLTIMSQKIEPGRRQ
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaatggatcacagccatcgataaaagaccgtgtgatcgaaatttacgtgat
gccgaactcatatcctgtcgtttacgacgtgttgaaccactatgccgtttgcctggctca
gcgctacagcaattggccatgtgtggcttctacgaagatttagagaaaggaatcacctta
tttcgagccggcgaacaaggtcgtttttggtatgcggtactcggtggatcgttggaagtt
cgttatcatgcacctgacacagaaaataagagccctgtaacactgtgcaatttaggtgtt
ggagctacatttggtgaatcaatcctgcatgatctgccgcgcgatagcacagttgtgaca
aaaacgacctgcgaactattacgtgttgaaacgaaagatttccgtttaatatgggagaaa
aataaagaattaatgaacgacattatcaccaattgcaaactcaaaaatggttttggacgt
ggtatcacaccggccgcacagacgtcacctgttcgtcgcgcaaacagtccagatcatcca
aatccggcattagcaatcacggagattccaagcccggctatagcacgaattggatgggca
ctacgtgttctattactatctgatagctccagctgtctcaaagatcgaaaggtttcaggc
aaattgattcgaaaatgtgctttgggcaccgaacttgtcgactggctgatgaatttatcg
gtaatcgtgcatacaagaacacaggcagctggcatgtggcaagctattctcgaggaaggt
gttttaagtcacgtgaacaaagagcaaccgtttaaagataaatgtttcttatatcgattc
aaagtggatgaggatggtactggtggacaaccaacatcagacgaacaaaatgcggcaaac
gaacatgtacgagaagcgttgggcactcttttacatcgtggttctgatgctacgctacga
atgattttacgaaaaacatcgcatgagcgcacgcaagaggaactcgaattggtatttgaa
gagctacttcatattgcagccttatcacatctatcaacatcaataaaacgggaattggca
tcaattattgtgtttgaggcacatgcttatgcgggcaccattttatttaatcagggcgac
gaaggacgttcatggtacattatactaaaaggatcagttgatgtggtaattcatggcaaa
ggaacggtcgctacactaaaagaaggcgatgattttggaaaattggcactcatcaacgat
gctccaagagctgccacaatagtactaaaagaaaataattgtcatcttgtgcgcgtcgat
aaggagcatttcaaccgaatattgcgtgatgtcgaggcgaatacattacgcttacaggag
catggaaaagatgttttggttttggaacgtgttgccaaacaacgaggtttttcctcagca
tttaagtatactgtgatgagcggtacaccacaaaaaatgctagaacatttacttgagact
cgcttaggaggacaagtgggaccaaacgatccattcttggacgatttcttacttacgcac
attgttttcatgccagtgccaatcctaatcaacgaattagcacatttatttcacaatgga
ggtaacgaagaaaatgattcatcagcaacagccgaagataccgagtatgcattgacgatg
cgaaaacgtgtaatacaatttgtccagaagtgggtgattgccgttaggcaagccgtcttc
gaagagccaataactgttgcttttatcgaggaattggcaagcatagttgatgctgatcct
gatttgcaagaagaagctggtatcatgcatcacgtattaactcaactattaagatatcag
gaagaacgtcaagcacaaactggacaaaaatggaaattacctccaaatggtcagccaatt
tgttcgttttctggtagtgaaaagcaaagtcgaacgccgattcggcctgaagatgacatt
atcttccgagtatattgtgcggaccacacatattgtacattgagatttccgataaatgcg
acgactgaaatgataaaagcgagcgctgccgacaaattgcaattgaatcgtgcaaatgaa
gatttggtgttagccgaggttaaatcgaatggtgaacgtaccatttttaaggatcatgac
gtgtcaataccgaccgcattgtatttgaatgctagaattttcgtttcatccaaagatcat
atcgatgcgctgacaccgttgcccgagcaagaagagatcaccgagggcattccactggaa
ttggagcaattgggtaccaaagaattagcatttcatattacgcaattcgactgggatttg
ttctggtcagtacatgaatacgaattgctctatcatacatttggcagacatcatttcggc
aagattacggccaatttggatgtattcatcagacgctttaacgaaatacaatattgggtt
gtcacagaaatcgcatcacaatcgagcattacaaaacgtgtattactgataaggaaattc
attaaattggccgcatattgtaaggagtatcagaatctgaatgcattttttgcggttgtg
atgggtttatcaaataatgcttgctcaaggctgacacaaagctgggataaagtaccgtca
aaatttaaaaaattgttcatggaattcgaggcgctcattgatccaagtcgaaaccatcga
gcttacaggagtttcgttggaaaattgcaaccgcctgttataccatttatgccattgctg
ttaaaggatatgacttttgcgcacgagggcaacaaaaccagtttggatggtttagtcaat
ttcgaaaagatgcacatgatggcacaaactatgcgaacaattcgcttttgtcgatcaaga
catttggtattggatccaccgtcgccaaaaagtgaaggtgatattcgtgcgtatgttggc
tgttttcgtgtgattgaaaaccaaagacaattgacaataatgtcacagaaaattgagccg
ggccgaaggcaatga
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