Cedecea neteri SSMD04: JT31_06215
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Entry
JT31_06215 CDS
T03298
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt00020
Citrate cycle (TCA cycle)
cnt00785
Lipoic acid metabolism
cnt01100
Metabolic pathways
cnt01110
Biosynthesis of secondary metabolites
cnt01120
Microbial metabolism in diverse environments
cnt01200
Carbon metabolism
cnt01210
2-Oxocarboxylic acid metabolism
Module
cnt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cnt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JT31_06215
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JT31_06215
Enzymes [BR:
cnt01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
JT31_06215
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AIR04224
UniProt:
A0A089Q117
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Position
complement(1335715..1338522)
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AA seq
935 aa
AA seq
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MQNGAMKPWLDSSWLAGANQSYIEQLYEDFLTDPDSVDAHWRSMFQQLAGTGARPDQFHS
KTRDYFRRLAKDASRYSTAITDPDTDVKQVKVLQLINAWRFRGHQAANLDPLGLWKQESV
PDLDPAFHNLTDEDLQQSFNVGSFAGGKETMKLADLIDALQQTYGGSIGAEYMHITNTEE
KRWIQQRIESVVGQSTFTPEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM
LKEMIRHAGKSGTREVVLGMAHRGRLNVLINVLGKKPQDLFDEFAGKHKEHLGTGDVKYH
MGFSSDVETEGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDKPGSNQVLPITIHGDA
AVAGQGVVQETLNMSKARGYEVGGTVRIVINNQIGFTTSNPLDARSTPYCTDIGKMVMAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPVMYQKIK
KHPTPRKIYADKLEQDKLATLEDATEMVNLYRDALDAGECVVNEWRPMNMHSFTWSPYLN
HEWDESYPNKVEMKRVQELAKRISTVPEAVEMQSRVAKIYGDRQEMANGNKLFDWGAAEN
LAYATLVDEGVSVRLSGEDAGRGTFFHRHAVIHNQSNGSTYTPLAHVHNSQGIFKVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPLAVSSLDELANGTFQPAIGEIDELDPKGVKRVVLCSGKVYYDLLEQRRKNDQK
DVAIVRIEQLYPFPHQAVQEALKPFAHVHDFVWCQEEPLNQGAWYCSQHHLREVIPFGSA
LRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcgatgaagccctggctggactcttcctggctggcgggcgcaaaccag
tcctacatagagcagctctatgaagacttcttaaccgatcctgactctgttgatgcgcac
tggcgcagcatgttccagcagttagctggcaccggagcgagaccggatcaattccattca
aaaacgcgtgattatttccgtcgtctggcgaaggatgcctcacgttactccaccgcaatc
accgatcctgacactgacgttaagcaagttaaggttctgcagctgatcaacgcctggcgt
ttccgcgggcatcaggcagcaaacctcgatccgcttggcctgtggaagcaagaatccgtt
cccgatctggatccggctttccacaatctgacggatgaggatctgcagcagagctttaac
gtggggtcttttgccggcggcaaagaaaccatgaagcttgcggatctgattgacgctctg
caacaaacctacggcggctctattggcgccgaatacatgcacattaccaacacagaagag
aaacgctggatccagcagcgcattgaatctgtggtgggccagtcaacctttacgccggaa
gagaaaaaacgcttcctgagcgagttgactgcagcagaaggtctggaacgttacctgggt
gccaaattccccggggcgaaacgcttctcgctggaaggcggcgacgcgctggttccgatg
ctcaaagagatgattcgccatgccggtaagagcggcacgcgcgaagtggtgctgggtatg
gcgcaccgcggtcgtcttaacgtgctgatcaacgttctgggtaaaaaaccgcaggatctg
ttcgacgaatttgccggtaaacataaagagcacctcggcaccggtgacgtgaagtaccac
atgggcttctcttccgacgtggaaaccgaaggcggcctggttcacctggcgctggcgttt
aacccgtctcaccttgaaatcgttagcccggtggttatcggttccgtgcgtgcgcgcctg
gatcgtctggataagccaggcagcaatcaggttctgccgatcaccatccacggtgatgcc
gccgtagccgggcagggcgtggttcaggaaaccctgaacatgtctaaagcgcgtggctac
gaagtgggcggtaccgtacgtatcgttatcaacaaccagattggtttcaccacctctaac
ccgctggatgctcgctccacgccgtactgtaccgatatcggtaagatggtgatggcgccg
attttccacgtgaatgcggacgacccggaagcggttgccttcgtgactcgtctggcgctg
gatttccgtaataccttcaaacgcgacgtgtttatcgacctggtttgctaccgtcgccac
ggtcataacgaagctgatgagccaagcgcaactcagcctgtgatgtaccagaaaatcaaa
aaacatccgaccccacgtaagatttacgccgacaagctggagcaggacaagctggccacg
ctggaagatgctaccgaaatggtgaatctgtaccgcgatgcgctggatgccggtgaatgc
gtcgtcaacgaatggcgtccgatgaacatgcactcctttacctggtcgccgtacctcaac
cacgagtgggacgaaagctacccgaacaaggttgagatgaagcgcgtgcaggaactggct
aagcgcatcagcaccgtgccggaagccgtagagatgcagtctcgcgtggctaaaatttac
ggcgatcgtcaggaaatggcgaacggtaacaagctgttcgactggggcgcagcggagaac
ctggcttacgccacgctggtagacgagggcgtgtccgtccgtctgtccggtgaagatgcg
gggcgcggtaccttcttccaccgtcatgcggttatccataaccagagcaacggttctacc
tatacgccgctggcgcacgtgcataacagccagggcattttcaaagtctgggattccgta
ctgtctgaagaagcggtgttggcctttgaatacggttacgccacggcagaaccacgtacg
ctgaccatttgggaagcccagttcggggacttcgctaacggtgctcaggtcgtgattgac
cagttcatcagctccggcgagcagaaatggggccgtatgtgtggcctggtaatgctgctg
ccgcatggctatgaaggtcagggtccggagcactcctccgcgcgtctggagcgttacctc
cagctgtgcgccgagcagaacatgcaggtttgtgtcccgtctacgccggctcaggtttat
cacatgctgcgtcgtcaggcgctgcgcgggatgcgccgtccgctggtagtgatgtcaccg
aaatctctgctgcgccatccgctggcggtttccagcctcgacgaactggccaacggcact
ttccagccggcaattggtgagattgacgaactggatcctaaaggcgtgaagcgtgtagta
ctgtgttccggtaaggtttactacgacctgcttgagcagcgtcgtaaaaacgaccagaag
gatgtggcgattgtgcgtatcgagcagctctatccgttcccgcatcaggcggtacaggaa
gcgctgaaaccgttcgctcacgtgcatgattttgtctggtgccaggaagagccgctgaac
cagggcgcctggtactgcagccaacaccacctccgcgaagtgattccgtttgggtctgcc
ctgcgttatgcaggtcgcccggcctccgcctctccggcggtagggtatatgtccgttcac
cagaagcagcagcaagatctggttaatgacgcgctgaacgtcgaataa
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