Cedecea neteri SSMD04: JT31_07950
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Entry
JT31_07950 CDS
T03298
Name
(GenBank) AMP-dependent synthetase
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt00470
D-Amino acid metabolism
cnt00552
Teichoic acid biosynthesis
cnt01100
Metabolic pathways
cnt01503
Cationic antimicrobial peptide (CAMP) resistance
cnt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JT31_07950
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
JT31_07950
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JT31_07950
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
JT31_07950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cnt01504
]
JT31_07950
Enzymes [BR:
cnt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
JT31_07950
Antimicrobial resistance genes [BR:
cnt01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
JT31_07950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
YajR_YAM
Ldh_1_C
Motif
Other DBs
NCBI-ProteinID:
AIR04546
UniProt:
A0A089PZZ1
LinkDB
All DBs
Position
1690956..1692389
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AA seq
477 aa
AA seq
DB search
MNLHPELHELQDFLRAALLDPARPHQLAISGSDSALTWQQLSTAAADWAQRYAQHQQPAG
TPVVLYGHQQAEFAVAIYSCLLHNIPYIPVDCIYPQERLKEICQLASAPYYYDVVTKQFV
ATGEAGSVLAEPDLAYIMFTSGSTGKPKGVQIGRESLWHFMQWVRQDFALPDVPVLMNHA
VFSFDLSLIPLLANLATGGHIVLNAKEDIAAENWLERLKTNGVSAWVSTPSFAYQKLLSP
QFNGDYLPELSVFVFIGEVLNKALVKQLRRRFPQAKILNSYGPTEATIATTVIEITDEIL
HSENDVLPVGTMMPESRMEITPEGELIIWGKNVMRGYLGLPQENAAKLLHRETEQYRGYR
TGDLGYEDGLLYCQGRNDNQIKLNGYRIEINEIENRLLAMSGISEAVVLPLMKSGGGVLR
IAAFCVTGLAPEAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDTQARTN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcaccccgagcttcatgaactgcaggattttctgcgagcggcattactcgat
cccgctcgcccacaccagttagccatcagcggcagcgatagcgccctgacctggcagcag
ctttctaccgccgcagccgactgggcacagcgttacgcgcagcaccagcagccggcgggc
acgccggtagttttgtacgggcatcagcaggccgagtttgcggtggctatctatagctgc
ctgctgcacaacatcccgtacattccggtggactgcatctacccgcaggagcggctgaaa
gagatctgccagcttgccagcgctccttactattacgatgtggtcacgaagcagtttgtg
gcgaccggagaagcgggcagcgtgctggccgaaccagatttggcctacatcatgtttact
tcaggcagcaccgggaaaccgaagggcgtgcagattggccgcgagagcctgtggcacttt
atgcagtgggtgcgccaggacttcgcgctgccggacgtgccggtgctgatgaaccacgcg
gtattcagcttcgacctttcccttatcccgttgctggcaaacctcgccaccggcgggcac
atcgtgctgaatgcgaaagaggacatcgccgctgagaactggcttgaacgcctgaaaacc
aacggcgtatcggcctgggtttccacgccctcttttgcctaccagaaactgctttccccg
cagtttaacggcgactatttacccgagctgagcgtgtttgtattcatcggcgaagtatta
aataaggcgctggtaaaacagctgcgccgccgcttcccgcaggccaaaatcctgaattcc
tatggcccgacggaggcgaccatcgccaccacggtgattgaaattaccgacgagatcctg
cacagcgaaaacgacgtgctgccggtgggcaccatgatgccggagtcgaggatggaaatt
accccggaaggtgagctgatcatctgggggaaaaacgtcatgcgcggttacctcgggctg
ccgcaggaaaacgcggcgaaattgctgcaccgcgaaactgagcaataccggggctaccgg
accggcgatctcggctacgaagacgggctgctttactgccagggccgcaacgacaaccag
atcaagctgaacggctaccgcattgagattaacgagattgaaaaccgcctgctggcgatg
tccggcattagcgaggccgtggtgctgccgctgatgaagtccggcggcggcgtgctgcgt
attgcggcgttttgcgtcaccggcctggcgccggaagccatcaaaacgtcgctgtcgaag
gtgatcccgccttatatggtgccttcgcaaatcattattaaagacgctttgccgctgaac
cctaacggcaaaatcgaccgcaagctgctggacacccaggctcgcacgaattaa
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