Cobetia sp. 4B: H2O77_03610
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Entry
H2O77_03610 CDS
T09692
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cobb
Cobetia sp. 4B
Pathway
cobb00300
Lysine biosynthesis
cobb00550
Peptidoglycan biosynthesis
cobb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H2O77_03610
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H2O77_03610
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cobb01011
]
H2O77_03610
Enzymes [BR:
cobb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
H2O77_03610
Peptidoglycan biosynthesis and degradation proteins [BR:
cobb01011
]
Precursor biosynthesis
Amino acid ligase
H2O77_03610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
OCD_Mu_crystall
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QWN38614
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All DBs
Position
849574..851103
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AA seq
509 aa
AA seq
DB search
MLAALLALWPGALNDDCRARLAARDDWHLTIDSRSAAQGSLFIAIPGIASDGRDYIAAAL
EGGAELVLAERPADGDARLALHSDDARVVWLENLGEQLGELGRQAFRVPESLTLVGVTGT
NGKSSVTHYIAELAEAMGTPAGMIGTLGIGRPGALVAGERTTPDALAVQAALKGLSLVGA
ELIAMEVSSHALDQGRVNGCRFTVAGYTNLSRDHLDYHGSMAAYAAAKAKLFKRPELKLA
VLNADDALARLMLAGMQRGVRVLAMGRDDVATLRVLDVFPEPLGQVAVIATPDGERELGL
NLMGRFNLDNALLAMLILHGLDYSFEGLFAAAPRLTPVPGRMQRLSRDGAPVVVVDYAHT
PEAVETALTALRAHLPARDDARLWCVLGCGGDRDSGKRPLMATAAEQGADRVVITDDNPR
SEDAAAIRQQMMTGIHARERVLDIAERGEAIAQVIRDAGEHDVILIAGKGHEDYQEIDGQ
RLPFSDVAHAVAALERRELSMLEGQERDA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagcattgctggcgctgtggccaggcgccctcaatgacgattgccgtgcacgg
cttgccgcgcgcgatgactggcatctgacgatcgacagtcgcagtgccgcgcagggttcc
ctcttcatcgccatccccggcatcgccagcgatggccgcgactatatcgccgcggcgctt
gagggcggtgccgagctggtgctggccgaaagacccgccgacggggatgcacgtctcgcg
ctgcattcagacgatgccagagtcgtctggctcgagaacctgggcgagcagctcggtgag
ctgggccgccaggccttccgcgtgcccgagtcgctgacgctggtcggggtcacgggcacc
aatggcaagtcttccgtcacccattacatcgccgagctggccgaagcgatgggcacgccc
gccggcatgatcggcacgctcggcatcgggcgtcccggcgcgctggtcgcgggcgagcgc
accacgcccgacgccctggccgtgcaggcggcgctcaagggcctgagcctggtcggtgcc
gagctgatcgcgatggaagtctcttcccatgcgctggatcaggggcgcgtcaatggctgt
cgcttcaccgtcgcgggctataccaatctttcgcgagaccacctcgactaccacggcagc
atggcggcctatgcggcggccaaggcgaagctgttcaagcgccccgaactcaagcttgcg
gtgctcaatgccgacgatgcgctggcgcgtctgatgctggccggcatgcagcgcggcgtg
cgcgtgctggcgatggggcgtgatgatgtcgcgaccctgcgcgtgctggatgttttcccc
gagccgctgggccaggttgccgtgatcgcgacgccggatggcgagcgtgagctgggcctc
aatctgatggggcgcttcaatctcgacaacgccttgctggcaatgctgatcctgcatggc
ctcgactattcgttcgaggggctgtttgccgccgcgccgcgtctgacgccggtgccgggc
cgcatgcagcgcctgagtcgtgatggcgcgccggtggtggtggtcgactacgcccacacg
ccggaggccgtcgagacggcactgaccgcgctgcgtgcccacctgccggcgcgggatgat
gcgcgcctgtggtgtgtgctcggctgtggcggcgatcgcgacagcggcaagcgtccgctg
atggccacggccgccgaacagggcgccgatcgtgtcgtgatcaccgatgacaatccgcgt
agcgaggatgccgctgccatccgtcagcagatgatgaccggcatccatgcccgcgagcgc
gtgctggatatcgccgagcgtggcgaagccattgcccaggtcatccgtgatgccggcgag
catgatgtcatcctgatcgccggcaaggggcacgaggactatcaggaaatcgacggtcag
cgactgccgttttccgatgtggcccatgcggtcgcggcgctggagcgtcgtgagctctcg
atgctggaaggtcaggagcgtgacgcatga
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