Cobetia sp. 4B: H2O77_04750
Help
Entry
H2O77_04750 CDS
T09692
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cobb
Cobetia sp. 4B
Pathway
cobb01501
beta-Lactam resistance
cobb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cobb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H2O77_04750
01503 Cationic antimicrobial peptide (CAMP) resistance
H2O77_04750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobb02000
]
H2O77_04750
01504 Antimicrobial resistance genes [BR:
cobb01504
]
H2O77_04750
Transporters [BR:
cobb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H2O77_04750
Antimicrobial resistance genes [BR:
cobb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H2O77_04750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
TgpA_N
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QWN37784
LinkDB
All DBs
Position
complement(1120728..1123859)
Genome browser
AA seq
1043 aa
AA seq
DB search
MARFFIDRPIFAWVLAIIVMLGGIFSILKLPIEQYPSLAPTSITIQATYSGASAQTVEDT
VTQVIEQQMNGIDNLLYMSSTSDSQGNASIELSFDTGTDPDIAQVQVQNKLQLATPRLPQ
SVQNQGVSVTKSSGSFLMVAAFVSDDGSMTKQQLTDYVASDIQDEVARVQGVGETQLFGA
PGAMRVWLDPQKLNNFKLTTSDVTTAISTQNNQIASGQLGNLPAEEGQQLNATIVAQTLF
ETPEQFGNILLKTQEDGSQVYLRDVGRAEKGAETYSTVSRYNGKPAAGLGIKLASGANAL
DTVQAVKDRLDELSAYFPPGMSFKVPYDTSPFVKISIEEVVMTLLEAVALVFLVMLLFLQ
NFRATLIPTIAVPVVLLGTFGVLEVLGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
HEEKLSPLEATRKSMGQITGALVGIGLVLSSVFIPMAFFPGTTGAIFRQFSVTIVSAMTL
SVLVALILTPALCATLLKPTKEKTTGFFGLFNRVFDRSNARYQKGVGGMLKRTGRSMLVY
ALIVVGCGVVFTRISTGFLPDEDQGYLFNQVILPVGSTQEQTLETLEKVEHHFLVDQEDA
VQEMFDVAGFSFAGRGQNMGLAFINLKPWDERERDSFSVVSEAQSYFGTLKEALVFAINP
PPIMELGNASGFDMMLVDRGGIGHKALTDARNQLLGMAGQNPAVTGLRPNGLEDSPQFTL
NIDELKATAMGVSLSEVYSTLSTAWGSTYVNDFLDNGRTKKVYVQAEASARMQPEDLKKW
YVRNTSGEMVPLSAFINGEWTYGSPQLERYNGVSSMELLGQAAPGYSTGEAMQAMEEMVS
QLNNGVALEWTGISLQESQSGGMAPYLYAISLVFVFLCLAALYESWSIPFSVMLVVPLGV
LGALLATWMRGLDNDVYFQVGLVTTIGLSAKNAILIVEFAKDLEVQGRSLIDATMEAVRM
RLRPILMTSLAFTLGAVPLAISTGAGAASRHAIGNGVIGGMISATVLAIFLVPVCYVVVR
RLFGEPKDLKRAHEAARQEDDLV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggccagattcttcatcgatcgccctatctttgcctgggtgctcgccatcatcgtgatg
ctggggggtatcttcagtatcctcaagctaccgatcgagcagtacccctcgctggcccct
accagcatcaccattcaggctacctactccggtgcctccgcccagacggtggaagacacg
gtgacccaggtcatcgagcagcagatgaacggcatcgacaatctgctgtacatgagctcg
acctcggactcccagggcaacgccagcatcgagctgagctttgacaccggcaccgatccc
gacatcgcccaggttcaggtacagaacaagctgcagctggccactccgcgcctgccgcaa
tccgtacagaaccagggtgtctcggtcaccaagtcctccggcagcttcctgatggtcgcg
gccttcgtctctgacgatggcagcatgaccaagcagcaattgaccgactatgtcgcctcc
gacatccaggatgaggtcgcgcgtgtccagggcgtcggcgagacccagctgttcggcgcg
ccgggggccatgcgtgtctggctcgacccgcagaagctcaacaacttcaagctgaccacc
agcgacgtcaccacggccatcagcacgcagaacaaccagatcgcctcgggccagctgggc
aatctgccggcggaagaaggccagcagctcaacgccaccatcgtggcgcagaccctgttt
gaaacgccggagcagttcggcaacatcctgctcaagacccaggaagatggctctcaggtc
tatctgcgtgacgtcggtcgcgccgagaaaggcgccgaaacctacagcaccgtcagccgc
tacaacggcaagcctgctgctggcctggggatcaagctggcctcgggcgccaacgcgctg
gacaccgtccaggccgtcaaggaccgcctcgatgagctgtccgcctacttcccgccgggc
atgagcttcaaggttccgtacgacacctcgcccttcgtcaagatctccatcgaagaagtg
gtgatgacactgctggaagccgtggcattggtcttcctggtgatgctgctgttcctgcag
aacttccgcgccaccctgattccgaccatcgcggtgccggtcgtgctgctgggcaccttc
ggggtgctggaagtgctgggcttctccatcaataccctgacgatgttcgccatggtgctc
gccatcgggctattggtcgacgatgcgatcgtggtggtggaaaacgtcgagcgcgtcatg
cacgaagagaagctctcgccactggaagcgacccgcaagtcgatgggccagatcaccggc
gcactggtgggtatcggcctggtgctgtcatccgtgttcattccgatggccttcttcccc
ggcaccaccggcgcgatcttccgtcagttctcggtgaccatcgtctcggcgatgacgctg
tccgtactggtggcgttgatcctgacgccggccctgtgcgccaccctgctcaagccgacc
aaggagaagaccaccggcttcttcggcctcttcaaccgggtcttcgatcgctccaacgcg
cgttaccagaaaggcgttggcggcatgctcaagcgcaccggtcgctcgatgctggtctat
gcattgatcgtcgtcggctgtggcgtggtattcacgcgcatctcgaccggcttcctgccg
gatgaggatcagggctatctgttcaaccaggtcatcctgccggtgggctccactcaggag
cagacgctcgagacgctggaaaaggtcgagcatcacttcctggtcgatcaggaagatgcg
gttcaggaaatgttcgacgtcgccggcttcagcttcgccggtcgcggtcagaacatgggc
ctggccttcatcaacctgaagccgtgggatgagcgcgagcgcgattccttcagcgtggtc
agtgaagcacagagctacttcggcaccttgaaggaagccctggtcttcgccatcaacccg
ccgccgatcatggagctgggcaacgccagcggcttcgacatgatgctggtcgaccgtggc
ggcatcggccacaaggcactgaccgacgcgcgcaaccagctgctgggcatggcgggccag
aatccggccgtgaccggcctgcgccccaatggtctggaagacagcccgcagttcacgctc
aatatcgatgaactcaaggcgacggcgatgggtgtctcgctgtcagaggtctactcgacg
ctttccacggcgtggggctcgacctatgtcaatgacttcctcgacaacggtcgtaccaag
aaggtctatgtgcaggcggaagccagtgcccgcatgcagccggaagacctcaagaagtgg
tacgtacgcaacacctccggcgagatggtgccgctgagtgccttcatcaacggcgagtgg
acctacgggtcgccgcagctggaacgctacaacggcgtctcctcgatggaactgctggga
caggcggcaccgggttactccaccggtgaggccatgcaggccatggaagagatggtcagc
cagctcaacaatggcgtcgcgctggaatggaccggcatctcgctgcaggaatcccagagt
ggcggcatggcaccgtatctgtatgccatctcgctggtcttcgtcttcctgtgtctggcc
gcgctgtatgagagctggagcattccgttctccgtcatgctggtggtaccgctgggggtg
ctgggtgccctgctcgccacctggatgcgcggactcgacaatgacgtctacttccaggtc
ggcctggtgacgaccatcgggctctcggccaagaacgcgatcctgatcgtcgagttcgcc
aaggaccttgaagtgcaaggtcgctcgctgatcgatgccaccatggaagccgtgcgcatg
cgtctgcgcccgatcctgatgacctcgctggccttcaccctgggtgccgtgccactggcc
atctcgacgggtgcgggtgccgccagccgtcacgccatcggtaacggcgtgatcggcggg
atgatctcggccacggtgctggcgatcttcctggtgccggtctgctatgtggtcgtgcgc
cgcctcttcggtgagccgaaggacctcaagcgagcccacgaagcggcccgccaggaggat
gaccttgtctga
DBGET
integrated database retrieval system
