Cobetia sp. cqz5-12: F8A90_04740
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Entry
F8A90_04740 CDS
T10568
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cobc Cobetia sp. cqz5-12
Pathway
cobc01501
beta-Lactam resistance
cobc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cobc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F8A90_04740
01503 Cationic antimicrobial peptide (CAMP) resistance
F8A90_04740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobc03036
]
F8A90_04740
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobc02000
]
F8A90_04740
01504 Antimicrobial resistance genes [BR:
cobc01504
]
F8A90_04740
Chromosome and associated proteins [BR:
cobc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F8A90_04740
Transporters [BR:
cobc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F8A90_04740
Antimicrobial resistance genes [BR:
cobc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F8A90_04740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
BSH_CzcB
HH_CzcB
SpoIIIAH
HH_AAEA_pHBA
HH_YBHG
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
QQK63509
LinkDB
All DBs
Position
complement(1112717..1113967)
Genome browser
AA seq
416 aa
AA seq
DB search
MVSTSPSHLRPSRRLPKLRLQRRPALWSAGLLLMGALLTGCNESGDADPSSAQAQSAPRA
TEVEALTVTAQDIPITNELAGRTSAYQSSEVRPQVGGVIQSRDFTEGSVVEEGQVLYHID
PRTYQADVDSAKASLERAQATLHTSQLQAKRYKTLVARKMVSQQDYDDAIATVGEDTADV
TSAKAALKSAQINLDYTTVKAAISGRIGKSSVTKGALVTASQDTALATIQQLDPIYVDVT
QSANDILRIKRELASNGKAASAPDMAMVELIFDDGSRYEHQGKLQFTDVSVDQSTGMVTL
RALFPNPDELLLPGMFVKARLVESVARNAILVPQKAVSRDSDGKATALVINDENKVESRE
LVTGQAIDHQWIVLQGLKTGDRVITSGLQKIQEGATVTVAEDETTGSNGGSESPAT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgacttctccgagtcacctccgcccatcgaggcgcttgccgaaactccgcctt
cagcgccgcccggccttgtggtctgcaggcctgctgttgatgggcgccttgctgacgggc
tgcaatgagagcggggatgctgacccgtcctccgctcaggcccagagcgccccacgtgcc
acggaagtcgaagctctcacggtcactgctcaggacatcccgatcaccaatgaactggca
ggccgcaccagcgcctaccagtcctccgaggttcgcccacaggtcggtggtgtcatccag
tcgcgtgatttcactgaaggcagcgtggtcgaggaaggtcaggtgctctatcacatcgat
ccgcgcacctatcaggcggacgtggatagtgccaaggccagtcttgagcgtgcccaggct
acgctgcatacctcgcagctgcaggcgaaacgctacaagacgctggtggcacgcaagatg
gtcagtcagcaggattacgatgacgccatcgccaccgtcggtgaagacacggcggatgtc
acctccgccaaggcagctctcaagagtgcccagatcaacctcgactacaccaccgtgaaa
gccgccatcagtgggcgaatcggcaaatccagcgtcaccaagggggccttggtcactgcc
agccaggacactgctctggcgacgattcagcaactggacccgatctatgtcgacgtgacc
caatcggccaatgacatcctcagaatcaagcgtgagctggccagcaacggcaaggccgcg
tccgctcccgacatggccatggtggaactgatcttcgacgatggcagccgctacgagcat
cagggcaagctccagttcaccgatgtcagcgtcgatcaaagcaccggcatggtgacattg
cgggcactgttcccgaatccggatgaactcctgctgcccggtatgttcgtgaaggcacgt
ctggtcgagtcagtggccagaaatgccatcctggtaccgcagaaggcggtcagccgcgac
agtgacggcaaggccacagcgctggtgatcaacgatgagaacaaggtggaaagccgtgaa
ctggtgaccggccaggccatcgatcaccagtggatcgtcctccagggactgaagacggga
gacagggtcatcaccagtggcctgcagaagatccaggaaggtgccaccgtcacggtggcg
gaagatgagacaacgggctcgaacggcggcagcgaaagtccggccacctga
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