Cobetia sp. D5: U0O11_04745
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Entry
U0O11_04745 CDS
T10202
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cobd Cobetia sp. D5
Pathway
cobd01501
beta-Lactam resistance
cobd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0O11_04745
01503 Cationic antimicrobial peptide (CAMP) resistance
U0O11_04745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobd03036
]
U0O11_04745
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_04745
01504 Antimicrobial resistance genes [BR:
cobd01504
]
U0O11_04745
Chromosome and associated proteins [BR:
cobd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
U0O11_04745
Transporters [BR:
cobd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
U0O11_04745
Antimicrobial resistance genes [BR:
cobd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0O11_04745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CzcB
Beta-barrel_RND_2
HH_EMRA
HH_CzcB
HH_YBHG
BSH_YknX
Fez1
BphC_D1
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WVS99486
LinkDB
All DBs
Position
complement(1118944..1120242)
Genome browser
AA seq
432 aa
AA seq
DB search
MAPTSPSQSRLQRHPLAFNARRLGLLPASLLLVGALLAGCSGDKEEAGQGSAAGASQAAQ
VDVVTVTAQDVPLTTELPGRTRAYQIAEVRPQVGGIIESRDFTEGSDVEEGQVLYHIDSR
TYRADVESAKASLARAEASLNTSSLKAKRYKNLVARKMVSQQDYDDAVATVGEDRADVAS
AKAAVSSAQINLDYTRVTSPISGRIGKSSVTKGALVTASQETSLATVQQLDPIYVDLTQS
ATEVLRLKRELGENRDAATAPVQTEVELVMEDGSVYGAKGKLQFADVTVDQGTGMVTLRA
LFPNEDELLLPGMFVRARLTEAVAKDAILIPQKAVSRDSTGQASVMTVNAENKVEAKQVV
IGQAIDNQWLVTSGLDSNDKVIVSGLQKIKPGATVEIASDETGTDQNAASQSRTAASSDS
SESEQARTGDSQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccccgacttcccccagtcaatcccgcttgcagagacacccattggctttcaatgcc
cgccgcctcggcctgcttccggcaagcctgctgctggtcggtgccctgctggccggctgt
agcggcgacaaggaggaggctggccaaggctccgccgcaggtgccagccaggccgctcag
gtcgatgtcgtcaccgtcactgcccaggatgtaccgctcaccaccgaacttccgggccgc
acgcgtgcctatcagatcgcggaagtacgtccgcaggtcggcggcatcatcgaatcgcgc
gacttcaccgaaggcagtgacgtcgaggaaggtcaggtgctctatcacatcgattcgcgc
acctatcgcgccgatgtcgaaagcgccaaggcgagcctggcgcgtgccgaggcgagcctc
aacacctcgagcctcaaggccaagcgctacaagaacctcgtcgcgcgcaagatggtcagc
cagcaggattacgatgatgccgtggccaccgtcggcgaagaccgtgccgatgtcgcctcg
gccaaggccgcggtatccagcgcgcagatcaacctggattacaccagggtcacctcaccg
atcagtggccgtatcggcaagtccagcgtcaccaagggcgcactggtcacggccagccag
gaaacaagcctggccaccgtccagcagctggaccccatctatgtcgacctgacccagtcc
gccaccgaggtgctgcgtctcaagcgtgagctgggcgagaatcgcgatgccgccaccgca
ccggtccagacggaagtcgagctggtgatggaagacggcagcgtctatggcgccaagggc
aagctgcagttcgcggatgtcactgtcgaccaggggaccggcatggtcacgctgcgcgca
ctgttccccaacgaagatgagctgctgctgccgggcatgttcgtgcgtgcccgcctgacc
gaagccgtcgccaaggatgccatcctgattccgcagaaggccgtgagccgtgacagcacg
ggccaggccagcgtgatgacggtcaatgccgagaacaaggtcgaggccaagcaggtcgtg
atcggtcaggccatcgacaatcagtggctggtgaccagcggcctcgacagcaatgacaag
gtcatcgtcagcggtctgcagaagatcaagccgggtgccacggtcgagatcgcctcggac
gagacaggcactgaccagaacgccgcatctcagtcgcggactgctgccagcagcgactcc
tcggaaagtgaacaggccaggaccggcgatagccagtaa
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