Cobetia sp. D5: U0O11_08620
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Entry
U0O11_08620 CDS
T10202
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cobd Cobetia sp. D5
Pathway
cobd00270
Cysteine and methionine metabolism
cobd00450
Selenocompound metabolism
cobd00670
One carbon pool by folate
cobd01100
Metabolic pathways
cobd01110
Biosynthesis of secondary metabolites
cobd01230
Biosynthesis of amino acids
cobd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
U0O11_08620 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
U0O11_08620 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U0O11_08620 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
U0O11_08620 (metH)
04980 Cobalamin transport and metabolism
U0O11_08620 (metH)
Enzymes [BR:
cobd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
U0O11_08620 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WVT00225
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Position
2065602..2069327
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AA seq
1241 aa
AA seq
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MAQAQSAVPYSLPLADALSQALQERILILDGGMGTMLQSYGLEEEDFRGERFADWPSDIK
GNNDLLALTRPDIVEAIHRAYFEAGADIVETNTFNATQLSQSDYGMQALVHEINLESARL
ARKTADAVAAETGIPRFVAGVLGPTSRTCSISPDVNDPAKRNVTFDILRDNYREAALALF
EGGADLILIETIFDTLNAKAAIYALEELFDEGHPRLPVMISGTITDASGRTLSGQTTEAF
WNSVRHARPLSIGLNCALGAEELRPYLRELSEKADTFVSAHPNAGLPNEFGEYDQTPDEM
AEIIGSFAAAGLLNIIGGCCGSTPEHIQAVKRVVAQYPPRKVPEIAPACRLSGLEPFNIQ
PDSLFVNVGERTNVTGSARFRRLIKEEDYTTALEVALEQVENGAQVIDVNMDEGMLESQE
AMVRFLNLIASEPDISRVPIMVDSSKWDIIEAGLKCIQGKAVVNSISLKEDEESFRQQAQ
ICRRHGAAVVVMAFDDVGQADTYQRKIEICERAYRMLVDDIGFPAEDIIFDPNIFAIATG
IEEHNNYGVDFIEATRWIHDNLPHAMISGGVSNVSFSFRGNNPVREAIHSVFLYHAIQAG
LSMGIVNAGQLALYDDLPRELRDAVEDVVLNRRDDSTERLLDIADKYKGDGSSGEKKEDL
EWRSWSVNKRIEHALVKGITVHIEEDTEEARLQAARPIEVIEGPLMDGMNVVGDLFGAGK
MFLPQVVKSARVMKQAVAHLIPFIEAEKSGETQAKGKIVMATVKGDVHDIGKNIVGVVLQ
CNNYEVIDLGVMVPAEKILQTAIDEKADIIGLSGLITPSLDEMVNVAREMQRRGFELPLL
IGGATTSKAHTAVKIEPQYEQPVIYVTDASRAVGVASRLLSPELKAAYVDQIRTEYAVVR
ERNAKRRPKAADLDYREARKRRFQPDWEHYTPPAPSFTGLKVFDDYDLNELVERIDWTPF
FMSWQLAGKYPKILQDETVGEAARSLFADARVMLRKLIDDKVLLARGVIGFWPANCVDDD
TLEVYADESRTQVVERLHHIRQQMTKNRDGVCHSLADFIAPRDSGKPDWIGGFAVTTGHG
ADELAGEYEAAGDDYNAIMVKALADRLAEAFAERLHERVRKEFWGYDSQEVLDNEALIAE
KYRGIRPAPGYPACPDHTEKATLFRMLEPETHVGMVLTESFAMWPAAAVSGWYFAHPESK
YFSTGKITRDQVQSLASRKAMELSEMERWLSPVLSYDPDAD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcccaatccgctgttccctattctctgcccctggccgacgcgctgagccag
gcgctgcaggagcgcatcctgatcctagatggcggcatgggcaccatgttgcaaagttat
gggctggaggaggaagacttccgtggcgagcgcttcgccgactggcccagcgacatcaag
ggcaacaacgacctgctggcgctgacccggccggacatcgtcgaggcgatccaccgcgcc
tatttcgaggccggcgccgacatcgtcgagaccaacaccttcaacgccactcagctgtcg
cagtccgattacggcatgcaggcgctggtccacgagatcaatctcgaatcggcacgcctg
gcgcgcaagacggcggacgccgtagccgccgagaccggcatcccgcgcttcgtcgcgggg
gtgctcggcccgaccagccgcacctgctccatctcgccggacgtgaatgaccccgccaag
cgcaacgtcaccttcgatatcctgcgcgacaactaccgcgaggccgcattggcgctcttc
gagggtggcgcggacctgatcctgatcgagaccatcttcgacaccctgaatgccaaggcg
gcgatctacgccctcgaggagctgttcgacgaaggccatccgcggctgccggtgatgatc
tccggcaccatcaccgatgcctcgggacgtacgctgtccggccagaccaccgaagccttc
tggaactcggtgcgtcacgcgcgcccgctgagcatcggtctcaactgcgcgctaggcgcc
gaggagctgcgcccctatctgcgtgagctgtccgagaaggccgataccttcgtctccgcg
caccccaacgccggcctgcccaacgaattcggcgagtacgaccagaccccggacgagatg
gccgagatcatcggttccttcgccgcggcaggcctgctcaacatcatcggcggctgctgt
ggctccaccccagagcacatccaggcggtcaagcgtgtggtggcccagtacccgccgcgc
aaggtgccagagatcgcgccggcctgccgcctgtcggggcttgagcccttcaacatccag
ccggactcgctgttcgtcaatgtcggtgagcgcaccaacgtcaccggctccgcgcgcttt
cgtcgcctgatcaaggaggaggactacaccaccgcgctggaagtcgccctcgagcaggtc
gagaacggcgcccaggtcatcgacgtcaacatggatgagggcatgctggagtcacaggag
gccatggtgcgcttcctgaatctgatcgcctcggagccggacatctcgcgagtgccgatc
atggtcgactcctcgaagtgggacatcatcgaggcggggctcaagtgcatccagggcaag
gcggtggtcaattccatctcgctcaaggaagacgaggaaagcttccggcagcaggcgcag
atctgtcgccgtcacggcgccgccgtggtggtcatggcctttgatgatgtcggccaggcc
gatacctatcagcgcaagatcgagatctgcgagcgcgcctaccggatgctggtcgatgac
atcggcttcccggccgaggacatcatcttcgaccccaacatcttcgccatcgccaccggc
atcgaagagcacaacaactacggtgttgatttcatcgaggccacgcgctggattcatgac
aacctgccccacgcgatgatttccggtggcgtctccaatgtgtccttctcgttccgtggc
aacaatccggtccgcgaagcgatccactcggtgttcctctatcacgccatccaggcaggc
ctgagcatgggcatcgtcaacgccggccagctggcgctctatgatgacctgccccgggag
ctgcgcgacgccgtcgaggacgtggtgctcaaccgccgcgatgacagcacagagcgtctg
ctcgacatcgccgacaagtacaagggcgatggcagcagcggtgagaagaaggaagacctc
gaatggcgtagctggtcggtcaacaagcgtatcgagcacgcgctggtcaagggcatcact
gtccatatcgaggaagataccgaagaggcacgcctgcaggctgcccgacccatcgaggtc
attgaagggccgttgatggacggtatgaatgtggttggcgatctgttcggcgcgggcaag
atgttcctgccccaggtggtgaagtcagcgcgcgtcatgaagcaagcggtcgcacatctg
atccccttcatcgaggccgagaagagcggcgagacccaggccaagggcaagatcgtcatg
gccaccgtcaagggcgatgtccacgacatcggcaagaacatcgtcggcgtggtgcttcag
tgcaataattatgaggtgatcgatctgggcgtgatggtgccggcggagaagattctgcag
accgccatcgacgagaaggccgacatcatcgggctttccgggctgatcactccgtcgctg
gacgagatggtcaatgtcgccagggagatgcagcgccgtggcttcgagttgccgctgctg
atcggtggtgcgaccacgtccaaggcacacaccgcggtcaagatcgaaccgcagtatgag
cagccggtcatctatgtcaccgacgcctcgcgcgcggtgggcgtggcctcgcgcctgctg
tcgccggaactcaaggcagcctatgtcgatcagattcgcaccgagtatgccgtggtgcgc
gagcgcaatgccaagcgccgccccaaggccgcggatctcgactaccgcgaggcgcgcaag
cgtcgtttccagccggactgggagcattacaccccgccggcacccagcttcaccggcctc
aaggtcttcgatgactacgatctgaatgaactggtcgagcgcatcgactggacgcccttc
ttcatgagctggcagctggcgggcaagtacccgaagattctgcaggatgagacggtcggg
gaagcggcgcgttcgctgtttgccgatgccagggtgatgctgcgcaagctgatcgatgac
aaggtgctgttggcgcgtggcgtgatcggcttctggccggccaactgtgtcgacgacgac
accctggaagtctacgccgatgaatcacgcacccaggtggtcgagcgcctgcatcacatc
cgtcagcagatgaccaagaaccgtgatggcgtctgtcacagtctcgccgacttcatcgcc
ccgcgtgacagcggcaagccggactggatcggtggcttcgccgtgaccaccgggcatggc
gcggatgaactggccggggagtacgaggcggctggcgatgattacaacgccatcatggtc
aaggcgctggcggaccgtctcgccgaagcctttgccgaacgcctccacgagcgcgtacgc
aaggagttctggggctacgatagccaggaagtgctcgacaacgaggcattgatcgccgag
aagtatcgcggcattcgcccggcgcctggctatccagcctgtccggaccataccgagaag
gccacgttgttccgtatgctcgaaccggagacccatgtcggcatggtgctgaccgagagc
ttcgccatgtggccggcggccgccgtctctggctggtacttcgcgcacccggagtcgaaa
tacttctccaccggcaagatcacccgcgatcaggtgcagtccctggcgagccgcaaggca
atggagctttccgagatggaacgctggctgtcgccggtgctgagctacgatcccgacgcc
gattga
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