Cobetia sp. D5: U0O11_14440
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Entry
U0O11_14440 CDS
T10202
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18298
membrane fusion protein, multidrug efflux system
Organism
cobd Cobetia sp. D5
Brite
KEGG Orthology (KO) [BR:
cobd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobd02000
]
U0O11_14440
01504 Antimicrobial resistance genes [BR:
cobd01504
]
U0O11_14440
Transporters [BR:
cobd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
U0O11_14440
Antimicrobial resistance genes [BR:
cobd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
U0O11_14440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
ATG16
Motif
Other DBs
NCBI-ProteinID:
WVS98051
LinkDB
All DBs
Position
3457500..3458786
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AA seq
428 aa
AA seq
DB search
MSRLNLRPARLPRIASSLLLTLGGLLALSACSEGNSEETGNAQQTPPTMEVVAAQSQPVA
AWHTYTTRLESPQRVQLRPRVSGEVEEVLFTEGSQVSAGTPLVRLDQRPFKAEVQRLEAD
VARIKAELANARSESGRAASLVKRNLISREEADSRSTTATGLNAQLKGAIAQLERARLDL
DYATIRAPIDGRLSNARITRGNTVQAGQSVLTTLVETRQLDAYIDISELTWNQDFANVSA
DDHLPVELQLAGQQDFPFHGELDFIDNSVDIDTGTLRIGTTFSADDAALRPGAFARLRLA
SPEIRDAVLIPERAIGTDLDRQFVLVVAEDNTLAYRGITTGPRFGPLRAVTDGLAAGDRV
LAAGPAKAGPGMPITPKLVEMPDDGALKALAARISRLQQQTAQPLDQHNDQDAATLAEAD
RQAAGGRS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagactgaacttacgtccggcgcgccttcctcgtatcgcttcttccctgctactg
acccttggtggccttctggcgctcagtgcctgcagcgagggcaacagtgaagagaccggc
aacgcgcaacagactcccccgacgatggaagtcgtcgccgcccagtcgcagccggtcgcg
gcctggcacacctacaccacacgtctggaatctccccagcgcgtgcaactgcgcccacgc
gtgagcggcgaagtcgaagaagtgctgttcaccgaaggcagtcaggtaagcgccggcacg
ccgctggtgcgtcttgatcaacgccccttcaaggccgaggttcagcgtctggaagcggat
gtcgcacgcatcaaggctgagctggccaatgcccgtagcgagtccggtcgcgccgccagt
ctggtcaagcgcaacctgatctcgcgcgaggaagccgattcgcgcagcacaaccgccacc
ggcctcaatgcacagctcaagggtgccatcgcccagctggagcgtgcccgtctggatctg
gactacgccaccatccgcgccccgatcgatggccgcctgtccaatgcgcgcatcacgcgt
ggcaacaccgtgcaggctggccagagcgtgctgaccacgctggtcgagacccgccagctg
gacgcctatatcgacatcagcgagctgacctggaaccaggacttcgcgaacgtcagcgcc
gatgaccacctgccggtcgaactgcagctggccggtcagcaggatttccccttccacggt
gagctcgatttcatcgacaacagcgtcgatatcgataccggcaccctgcggatcggcacc
accttcagcgccgatgatgccgccctgcgtccgggcgcctttgcacgcctgcgtctcgcc
tcgcccgagatccgtgatgccgtgctgattccggaacgcgccatcggcaccgatctggac
cgtcagttcgtgctggtggtcgccgaggacaacaccctcgcctaccgcggcatcaccacc
ggcccgcgcttcggcccgctgcgtgccgtcaccgatggcctggccgccggtgaccgcgtg
ctggccgcggggcctgccaaggcaggtccgggcatgccgatcacccccaagctggtcgag
atgcctgatgacggtgccctcaaggcactcgccgcgcgtatctcgcgcctgcagcagcag
accgcccagccgctggatcagcacaacgaccaggacgccgcgacactggccgaggctgac
cgtcaggcagccggaggccgttcgtga
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